Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 SNORD116-11-201ENST00000383882 92 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.405-201ENST00000383979 100 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.451-201ENST00000384200 100 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.524-201ENST00000384564 100 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.561-201ENST00000384694 100 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 AC243428.1-201ENST00000421099 264 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 CALM2P4-201ENST00000430810 426 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 MTND1P1-201ENST00000445453 368 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 MTND1P29-201ENST00000448112 647 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 AC105758.1-201ENST00000506038 399 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 AC093303.1-201ENST00000514549 295 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.04□□□□□ -2.24
KIF3AQ9Y496 AC134698.4-201ENST00000523451 826 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.04□□□□□ -2.24
KIF3AQ9Y496 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 AC024614.3-201ENST00000637860 256 ntBASIC1.04□□□□□ -2.24
KIF3AQ9Y496 RNU6-222P-201ENST00000362438 107 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 RNU6-1059P-201ENST00000363752 98 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 SNORD116-2-201ENST00000384274 95 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.559-201ENST00000384686 107 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 SNORD116-6-201ENST00000384711 96 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 SNORD41-201ENST00000386967 70 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 AC093850.1-201ENST00000454121 251 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 RNU7-94P-201ENST00000459576 63 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.03□□□□□ -2.24
KIF3AQ9Y496 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.03□□□□□ -2.24
KIF3AQ9Y496 RNA5SP168-201ENST00000516642 112 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 RN7SKP49-201ENST00000516675 260 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 MIR4273-201ENST00000582824 84 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 7SK.7-201ENST00000603504 247 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 GHRLOS.1-201ENST00000610995 70 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 AC010999.1-201ENST00000611856 324 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.03□□□□□ -2.24
KIF3AQ9Y496 MIR1321-201ENST00000637766 79 ntBASIC1.03□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.41-201ENST00000362646 102 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 RNU4-79P-201ENST00000362764 141 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.02□□□□□ -2.25
KIF3AQ9Y496 RNU7-175P-201ENST00000515915 61 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 RNU6-314P-201ENST00000516574 104 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 AC090617.10-201ENST00000624308 134 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 MIR6079-201ENST00000635807 62 ntBASIC1.02□□□□□ -2.25
KIF3AQ9Y496 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.48-201ENST00000362710 103 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 RNU6-199P-201ENST00000362954 107 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.265-201ENST00000364677 108 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 U8.16-201ENST00000391279 133 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 MIR1287-201ENST00000408492 90 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 MTND3P23-201ENST00000431980 347 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.01□□□□□ -2.25
KIF3AQ9Y496 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.01□□□□□ -2.25
KIF3AQ9Y496 SNORA31.4-201ENST00000516049 129 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 AL162424.1-201ENST00000602325 221 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
KIF3AQ9Y496 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.191-201ENST00000363972 113 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 RNU4-75P-201ENST00000364621 146 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.363-201ENST00000365529 113 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 MIR146A-201ENST00000385201 99 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1□□□□□ -2.25
KIF3AQ9Y496 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 AC018710.1-201ENST00000506509 158 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 AC097462.1-201ENST00000514125 324 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 RNU6-917P-201ENST00000516294 104 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 RNU7-172P-201ENST00000517125 64 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1□□□□□ -2.25
KIF3AQ9Y496 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1□□□□□ -2.25
KIF3AQ9Y496 MIR4452-201ENST00000583004 71 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 AC013244.2-201ENST00000603396 103 ntBASIC1□□□□□ -2.25
KIF3AQ9Y496 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.267-201ENST00000364679 109 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 SNORA20B-201ENST00000384220 132 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 MIR653-201ENST00000385279 96 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 MTCO2P7-201ENST00000446518 666 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 AC091021.1-201ENST00000468051 388 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 AC010598.1-201ENST00000510378 103 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.683-201ENST00000516508 93 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 RNU6-506P-201ENST00000516553 94 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 AC093023.1-201ENST00000547375 507 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 AC245505.1-201ENST00000556398 224 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.99□□□□□ -2.25
KIF3AQ9Y496 SNORA28-201ENST00000606769 126 ntBASIC0.99□□□□□ -2.25
KIF3AQ9Y496 AC005592.1-201ENST00000566527 1640 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 RNU5F-3P-201ENST00000363767 117 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 RNU6-281P-201ENST00000384212 103 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 RNU6-424P-201ENST00000384367 105 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.517-201ENST00000384551 106 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 RNU6-1054P-201ENST00000411293 104 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
KIF3AQ9Y496 AC063976.4-201ENST00000421971 163 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 USP9YP30-201ENST00000430729 455 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 237.2 ms