Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF216Q9NWF9 MIR378J-201ENST00000611988 109 ntBASIC5.63□□□□□ -1.51
RNF216Q9NWF9 MIR6839-201ENST00000620425 113 ntBASIC5.63□□□□□ -1.51
RNF216Q9NWF9 MIR8054-201ENST00000620877 86 ntBASIC5.63□□□□□ -1.51
RNF216Q9NWF9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF216Q9NWF9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF216Q9NWF9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF216Q9NWF9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF216Q9NWF9 AC015813.6-201ENST00000624409 5808 ntBASIC5.62□□□□□ -1.51
RNF216Q9NWF9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 SNORD114-6-201ENST00000364393 72 ntBASIC5.62□□□□□ -1.51
RNF216Q9NWF9 MIR192-201ENST00000384915 110 ntBASIC5.62□□□□□ -1.51
RNF216Q9NWF9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 uc_338.18-201ENST00000615451 175 ntBASIC5.62□□□□□ -1.51
RNF216Q9NWF9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RNF216Q9NWF9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF216Q9NWF9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF216Q9NWF9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF216Q9NWF9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
RNF216Q9NWF9 AC091390.1-201ENST00000433904 331 ntBASIC5.61□□□□□ -1.51
RNF216Q9NWF9 MIR4536-1-201ENST00000583537 88 ntBASIC5.61□□□□□ -1.51
RNF216Q9NWF9 MIR5195-201ENST00000583555 115 ntBASIC5.61□□□□□ -1.51
RNF216Q9NWF9 AC067747.1-201ENST00000608026 250 ntBASIC5.61□□□□□ -1.51
RNF216Q9NWF9 MIR7641-1-201ENST00000627518 61 ntBASIC5.61□□□□□ -1.51
RNF216Q9NWF9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF216Q9NWF9 MAPK10-303ENST00000641324 3959 ntBASIC5.61□□□□□ -1.51
RNF216Q9NWF9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
RNF216Q9NWF9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF216Q9NWF9 RNA5SP28-201ENST00000363841 119 ntBASIC5.6□□□□□ -1.51
RNF216Q9NWF9 MIR136-201ENST00000385207 82 ntBASIC5.6□□□□□ -1.51
RNF216Q9NWF9 SNORA48.4-201ENST00000391089 134 ntBASIC5.6□□□□□ -1.51
RNF216Q9NWF9 RPS29P33-201ENST00000456717 146 ntBASIC5.6□□□□□ -1.51
RNF216Q9NWF9 BX510359.1-201ENST00000456973 237 ntBASIC5.6□□□□□ -1.51
RNF216Q9NWF9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF216Q9NWF9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF216Q9NWF9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF216Q9NWF9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF216Q9NWF9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF216Q9NWF9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
RNF216Q9NWF9 SNORA11-201ENST00000408789 128 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 RN7SKP177-201ENST00000410567 355 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 AC104333.2-201ENST00000422630 192 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF216Q9NWF9 AC133485.1-201ENST00000567176 124 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 MIR4691-201ENST00000583764 85 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 RN7SL435P-201ENST00000584418 282 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.59□□□□□ -1.51
RNF216Q9NWF9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF216Q9NWF9 AC010300.1-201ENST00000600671 5134 ntBASIC5.59□□□□□ -1.52
RNF216Q9NWF9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 Y_RNA.12-201ENST00000362393 112 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 MIR1262-201ENST00000408276 93 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 RN7SL443P-201ENST00000464331 290 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 RN7SL814P-201ENST00000487715 300 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 SNORA48.11-201ENST00000517015 89 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 YPEL5P3-201ENST00000547227 352 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 MIR3199-1-201ENST00000582434 88 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 MIR4737-201ENST00000583979 81 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 MIR8065-201ENST00000620577 100 ntBASIC5.58□□□□□ -1.52
RNF216Q9NWF9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF216Q9NWF9 AP000542.2-201ENST00000623199 6179 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF216Q9NWF9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF216Q9NWF9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF216Q9NWF9 SNORA25.4-201ENST00000363666 124 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 RNA5SP513-201ENST00000364648 118 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 RNA5SP428-201ENST00000365129 132 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 CD24P4-201ENST00000382840 243 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 SNORA72.6-201ENST00000384520 129 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 MIR95-201ENST00000385072 81 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 RNU4-83P-201ENST00000410863 133 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 RN7SL319P-201ENST00000480656 221 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 AC023790.1-201ENST00000482174 347 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 SCARNA11.3-201ENST00000517276 130 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 MIR4270-201ENST00000581799 70 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF216Q9NWF9 AP000346.3-201ENST00000622821 210 ntBASIC5.57□□□□□ -1.52
RNF216Q9NWF9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF216Q9NWF9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF216Q9NWF9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RNF216Q9NWF9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF216Q9NWF9 MIR3074-201ENST00000384885 81 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms