Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNA5SP139-201ENST00000364340 117 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 SNORA9-201ENST00000384215 133 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 MIR218-1-201ENST00000384999 110 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 SNORA26-201ENST00000391286 122 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 AL603914.1-201ENST00000401964 204 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 MLLT10P1-201ENST00000418346 262 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 AC092185.1-201ENST00000491371 97 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.6□□□□□ -1.83
IFT43Q96FT9 RNU6-1061P-201ENST00000516530 99 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 RNA5SP490-201ENST00000517141 136 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 RNA5SP380-201ENST00000517190 98 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 AL161756.2-201ENST00000604597 246 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 AC090115.4-201ENST00000609970 188 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 MIR7157-201ENST00000635801 60 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 MIR7515-201ENST00000637837 67 ntBASIC3.6□□□□□ -1.83
IFT43Q96FT9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.6□□□□□ -1.83
IFT43Q96FT9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
IFT43Q96FT9 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 MTND5P32-201ENST00000560711 1802 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
IFT43Q96FT9 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 RNU1-22P-201ENST00000363334 158 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 RNU6-546P-201ENST00000383991 107 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 AC063976.4-201ENST00000421971 163 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.59□□□□□ -1.83
IFT43Q96FT9 SNORD77.4-201ENST00000516158 81 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 RNU6-126P-201ENST00000516685 103 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 SCARNA3-201ENST00000517097 143 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 AC097639.2-201ENST00000603159 172 ntBASIC3.59□□□□□ -1.83
IFT43Q96FT9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
IFT43Q96FT9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
IFT43Q96FT9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
IFT43Q96FT9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.59□□□□□ -1.84
IFT43Q96FT9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
IFT43Q96FT9 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 RNU6-1255P-201ENST00000363434 112 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 RNU6-647P-201ENST00000364243 107 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 AC009969.1-201ENST00000438726 172 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 SNORA70.18-201ENST00000516696 98 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 RPL23AP91-201ENST00000569211 455 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 MIR4438-201ENST00000585271 93 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 MIR5739-201ENST00000619803 80 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 U4.6-201ENST00000621618 127 ntBASIC3.58□□□□□ -1.84
IFT43Q96FT9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
IFT43Q96FT9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.58□□□□□ -1.84
IFT43Q96FT9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.57□□□□□ -1.84
IFT43Q96FT9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
IFT43Q96FT9 Y_RNA.634-201ENST00000364811 113 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 Y_RNA.309-201ENST00000365046 111 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 RNU6-147P-201ENST00000383983 107 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 MIR483-201ENST00000385070 76 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 RNU2-32P-201ENST00000411193 191 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 AC063976.3-201ENST00000426849 329 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 MTCO1P44-201ENST00000441935 243 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 RPS4XP11-201ENST00000446897 772 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 AC245102.2-201ENST00000448956 180 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 RPL27AP5-201ENST00000469428 449 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 AC097462.1-201ENST00000514125 324 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 SNORD33.1-201ENST00000516213 88 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 Y_RNA.690-201ENST00000516603 95 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 RNU7-172P-201ENST00000517125 64 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 AC103988.1-201ENST00000566382 2177 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 AC105245.1-201ENST00000581934 244 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 MIR5195-201ENST00000583555 115 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 MIR3117-201ENST00000584034 78 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.57□□□□□ -1.84
IFT43Q96FT9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.57□□□□□ -1.84
IFT43Q96FT9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
IFT43Q96FT9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
IFT43Q96FT9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
IFT43Q96FT9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
IFT43Q96FT9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.57□□□□□ -1.84
IFT43Q96FT9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
IFT43Q96FT9 AC068647.1-201ENST00000489539 2265 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.56□□□□□ -1.84
IFT43Q96FT9 CD24P4-201ENST00000382840 243 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 MIR548A3-201ENST00000385297 97 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 Y_RNA.630-201ENST00000411370 108 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 AC068657.1-201ENST00000520807 306 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.56□□□□□ -1.84
IFT43Q96FT9 MIR3199-1-201ENST00000582434 88 ntBASIC3.56□□□□□ -1.84
IFT43Q96FT9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.56□□□□□ -1.84
IFT43Q96FT9 AC080128.1-201ENST00000474389 1917 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 RNU1-33P-201ENST00000364249 162 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 SNORD58C-201ENST00000365223 64 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 SNORD116-21-201ENST00000384507 92 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 RNVU1-14-201ENST00000384770 164 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
IFT43Q96FT9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.55□□□□□ -1.84
IFT43Q96FT9 AC025750.2-201ENST00000442609 450 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 RPS29P21-201ENST00000496272 170 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 SNORA70.24-201ENST00000517233 118 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms