Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.02□□□□□ -2.41
TTC28Q96AY4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-199P-201ENST00000362954 107 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 DEFB131C-201ENST00000528817 165 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC091965.4-201ENST00000607691 587 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC245297.2-201ENST00000610119 565 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC131280.1-202ENST00000624067 4211 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-462P-201ENST00000362659 105 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNA5SP264-201ENST00000363115 107 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-179P-201ENST00000363350 107 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 SNORD113.3-201ENST00000364630 78 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNY4P16-201ENST00000364768 94 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AL035398.1-201ENST00000430869 322 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 MTCO1P19-201ENST00000443487 500 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC074290.1-201ENST00000448883 135 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC026782.1-201ENST00000512952 449 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC105029.1-201ENST00000520250 669 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AF235103.2-201ENST00000525753 346 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC012433.1-201ENST00000588916 398 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC004223.2-201ENST00000590309 544 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AL117336.2-201ENST00000602435 335 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AP002802.2-201ENST00000605877 235 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 AC006927.2-201ENST00000639256 389 ntBASIC-0.03□□□□□ -2.41
TTC28Q96AY4 RNU4-84P-201ENST00000364200 139 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU4-76P-201ENST00000364509 141 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6-384P-201ENST00000364900 104 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6-128P-201ENST00000383976 107 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6-190P-201ENST00000384154 102 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 SNORD83B-201ENST00000386745 93 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC016907.1-201ENST00000419483 435 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU7-57P-201ENST00000459540 60 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 HMGB1P29-201ENST00000505659 499 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 MIR3118-1-201ENST00000581787 76 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 MIR548AC-201ENST00000585049 88 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AL359697.1-201ENST00000624879 587 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC073343.1-201ENST00000328239 651 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6-369P-201ENST00000362515 102 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6-417P-201ENST00000384712 107 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 MIR520G-201ENST00000385064 90 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 MIR520H-201ENST00000385126 88 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNA5SP323-201ENST00000391094 133 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 CDK8P2-201ENST00000415020 547 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6-863P-201ENST00000515989 104 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU2-34P-201ENST00000516534 121 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.04□□□□□ -2.42
TTC28Q96AY4 uc_338.36-201ENST00000622331 158 ntBASIC-0.04□□□□□ -2.42
TTC28Q96AY4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RN7SKP266-201ENST00000410232 287 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RPS24P1-201ENST00000438550 371 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC009237.7-201ENST00000447357 229 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 MTCO3P27-201ENST00000514397 196 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RNU2-46P-201ENST00000517038 113 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RNU6-685P-201ENST00000517088 95 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.05□□□□□ -2.42
TTC28Q96AY4 MIR544B-201ENST00000582372 78 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 MIR4307-201ENST00000582802 84 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AL357078.3-201ENST00000607528 618 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC097478.2-201ENST00000610572 514 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AC008250.2-201ENST00000615261 205 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 AL163152.1-201ENST00000642001 374 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 SNORD18.1-201ENST00000363807 70 ntBASIC-0.05□□□□□ -2.42
TTC28Q96AY4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 254.9 ms