Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 FGF7P6-202ENST00000451282 293 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 snoU13.18-201ENST00000459483 104 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 RNU6-221P-201ENST00000459541 99 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC114982.1-201ENST00000469402 321 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC091179.3-201ENST00000474761 144 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC087343.1-201ENST00000477341 475 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC103851.1-201ENST00000506833 274 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.84□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.670-201ENST00000516255 105 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC025647.1-201ENST00000517879 253 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC011712.1-201ENST00000588959 234 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC060780.3-201ENST00000589464 80 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 MZT1P2-201ENST00000604387 248 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC018462.2-201ENST00000605375 395 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AL353149.1-201ENST00000610667 244 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 MIR8065-201ENST00000620577 100 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AL359697.1-201ENST00000624879 587 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 snoZ196.1-201ENST00000625269 89 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 AC099654.5-201ENST00000636479 350 ntBASIC0.84□□□□□ -2.27
TNFRSF9Q07011 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.2-201ENST00000362330 96 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 RNU6-222P-201ENST00000362438 107 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.106-201ENST00000363189 100 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 RNU6-137P-201ENST00000363680 108 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 SNORA4.2-201ENST00000365313 147 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TNFRSF9Q07011 MIR1185-2-201ENST00000408687 86 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.594-201ENST00000410373 140 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 RNU6-1050P-201ENST00000410388 107 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 AC074085.1-201ENST00000413598 418 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 AL139396.1-201ENST00000421137 167 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 RPL26P26-201ENST00000480251 434 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.83□□□□□ -2.28
TNFRSF9Q07011 RNU7-30P-201ENST00000516835 62 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 AC134698.4-201ENST00000523451 826 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFRSF9Q07011 MIR5695-201ENST00000579717 85 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 7SK.7-201ENST00000603504 247 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 SNORD114-21-201ENST00000606412 72 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 AC005014.2-201ENST00000607795 599 ntBASIC0.83□□□□□ -2.28
TNFRSF9Q07011 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TNFRSF9Q07011 MTND5P16-201ENST00000460269 1703 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.179-201ENST00000363844 90 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RNU6-1240P-201ENST00000365155 104 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RNU6-1080P-201ENST00000383982 107 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RNU6-281P-201ENST00000384212 103 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RNU6-331P-201ENST00000384724 107 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 MIR1253-201ENST00000408273 105 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFRSF9Q07011 FTH1P12-201ENST00000432137 551 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AC074290.1-201ENST00000448883 135 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RPS29P1-201ENST00000465274 159 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AL163195.1-201ENST00000496941 348 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RNA5SP220-201ENST00000516298 104 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AC011604.1-201ENST00000545978 196 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.82□□□□□ -2.28
TNFRSF9Q07011 FRG2DP-202ENST00000566967 323 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 SNORA4-201ENST00000584302 138 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AC092794.1-201ENST00000612734 582 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 U6.108-201ENST00000637764 58 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 AC100821.1-201ENST00000523153 2479 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 CASC19-280ENST00000642102 1351 ntBASIC0.82□□□□□ -2.28
TNFRSF9Q07011 RNU6-874P-201ENST00000362390 105 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.88-201ENST00000363029 99 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 U3.8-201ENST00000363675 217 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU1-124P-201ENST00000363861 145 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.184-201ENST00000363884 108 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU6-280P-201ENST00000364145 104 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.248-201ENST00000364501 109 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU1-93P-201ENST00000364704 169 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.404-201ENST00000383978 102 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU6-767P-201ENST00000384132 107 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU6-793P-201ENST00000384233 104 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNY1P14-201ENST00000384426 108 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU6-1065P-201ENST00000384513 106 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNA5SP109-201ENST00000391010 116 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TNFRSF9Q07011 EBAG9P1-201ENST00000418955 543 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 USMG5P1-201ENST00000425964 177 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AC005002.2-201ENST00000438228 269 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AL606517.2-201ENST00000442855 241 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.81□□□□□ -2.28
TNFRSF9Q07011 MTND3P10-201ENST00000450967 341 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RPL7P42-201ENST00000481005 679 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AC093303.1-201ENST00000514549 295 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU6-1146P-201ENST00000516282 102 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 RNU6-1016P-201ENST00000516689 94 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AC091144.1-201ENST00000519573 138 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms