Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.22□□□□□ -2.05
MMP3P08254 AC093259.1-201ENST00000509755 300 ntBASIC2.22□□□□□ -2.05
MMP3P08254 RNU6-570P-201ENST00000517051 105 ntBASIC2.22□□□□□ -2.05
MMP3P08254 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.22□□□□□ -2.05
MMP3P08254 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
MMP3P08254 MIR4753-201ENST00000585119 83 ntBASIC2.22□□□□□ -2.05
MMP3P08254 AC091932.3-201ENST00000624223 323 ntBASIC2.22□□□□□ -2.05
MMP3P08254 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
MMP3P08254 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.21□□□□□ -2.05
MMP3P08254 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
MMP3P08254 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
MMP3P08254 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
MMP3P08254 SNORD115-3-201ENST00000363100 82 ntBASIC2.21□□□□□ -2.06
MMP3P08254 Y_RNA.149-201ENST00000363558 117 ntBASIC2.21□□□□□ -2.06
MMP3P08254 Y_RNA.176-201ENST00000363815 109 ntBASIC2.21□□□□□ -2.06
MMP3P08254 AL357139.1-201ENST00000407792 426 ntBASIC2.21□□□□□ -2.06
MMP3P08254 MTCYBP9-201ENST00000431021 303 ntBASIC2.21□□□□□ -2.06
MMP3P08254 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
MMP3P08254 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
MMP3P08254 MTCO2P24-201ENST00000515611 426 ntBASIC2.21□□□□□ -2.06
MMP3P08254 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
MMP3P08254 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.21□□□□□ -2.06
MMP3P08254 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.21□□□□□ -2.06
MMP3P08254 AC009127.3-201ENST00000570531 403 ntBASIC2.21□□□□□ -2.06
MMP3P08254 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.21□□□□□ -2.06
MMP3P08254 AC005176.2-201ENST00000596933 147 ntBASIC2.21□□□□□ -2.06
MMP3P08254 RPL17P51-201ENST00000605218 238 ntBASIC2.21□□□□□ -2.06
MMP3P08254 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.21□□□□□ -2.06
MMP3P08254 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.2□□□□□ -2.06
MMP3P08254 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
MMP3P08254 Y_RNA.101-201ENST00000363154 102 ntBASIC2.2□□□□□ -2.06
MMP3P08254 Y_RNA.144-201ENST00000363521 113 ntBASIC2.2□□□□□ -2.06
MMP3P08254 Y_RNA.286-201ENST00000364813 102 ntBASIC2.2□□□□□ -2.06
MMP3P08254 Y_RNA.396-201ENST00000383949 103 ntBASIC2.2□□□□□ -2.06
MMP3P08254 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
MMP3P08254 RNU6-713P-201ENST00000384761 107 ntBASIC2.2□□□□□ -2.06
MMP3P08254 MIR586-201ENST00000385035 97 ntBASIC2.2□□□□□ -2.06
MMP3P08254 MIR1262-201ENST00000408276 93 ntBASIC2.2□□□□□ -2.06
MMP3P08254 RNU6-57P-201ENST00000411348 103 ntBASIC2.2□□□□□ -2.06
MMP3P08254 AC139712.2-201ENST00000424302 339 ntBASIC2.2□□□□□ -2.06
MMP3P08254 AC016925.1-201ENST00000458303 298 ntBASIC2.2□□□□□ -2.06
MMP3P08254 AC010531.2-201ENST00000465012 153 ntBASIC2.2□□□□□ -2.06
MMP3P08254 AC074133.1-201ENST00000515696 183 ntBASIC2.2□□□□□ -2.06
MMP3P08254 RNU7-110P-201ENST00000516891 62 ntBASIC2.2□□□□□ -2.06
MMP3P08254 AP003733.2-201ENST00000529409 171 ntBASIC2.2□□□□□ -2.06
MMP3P08254 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
MMP3P08254 PRR13P7-201ENST00000605538 430 ntBASIC2.2□□□□□ -2.06
MMP3P08254 AC004467.1-201ENST00000615678 330 ntBASIC2.2□□□□□ -2.06
MMP3P08254 MIR3674-201ENST00000636576 68 ntBASIC2.2□□□□□ -2.06
MMP3P08254 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MMP3P08254 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
MMP3P08254 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MMP3P08254 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MMP3P08254 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MMP3P08254 RNU6-454P-201ENST00000364292 107 ntBASIC2.19□□□□□ -2.06
MMP3P08254 Y_RNA.276-201ENST00000364732 109 ntBASIC2.19□□□□□ -2.06
MMP3P08254 SNORA72.2-201ENST00000365028 127 ntBASIC2.19□□□□□ -2.06
MMP3P08254 RNU6-1175P-201ENST00000365200 107 ntBASIC2.19□□□□□ -2.06
MMP3P08254 RNU6-1264P-201ENST00000383891 107 ntBASIC2.19□□□□□ -2.06
MMP3P08254 SNORA40.18-201ENST00000391200 128 ntBASIC2.19□□□□□ -2.06
MMP3P08254 MIR300-201ENST00000401138 83 ntBASIC2.19□□□□□ -2.06
MMP3P08254 RPL23AP36-201ENST00000413895 458 ntBASIC2.19□□□□□ -2.06
MMP3P08254 AL731563.1-201ENST00000442202 214 ntBASIC2.19□□□□□ -2.06
MMP3P08254 AL137159.1-201ENST00000452808 512 ntBASIC2.19□□□□□ -2.06
MMP3P08254 RNU7-57P-201ENST00000459540 60 ntBASIC2.19□□□□□ -2.06
MMP3P08254 AC108729.3-201ENST00000513484 108 ntBASIC2.19□□□□□ -2.06
MMP3P08254 Y_RNA.713-201ENST00000517013 96 ntBASIC2.19□□□□□ -2.06
MMP3P08254 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
MMP3P08254 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.19□□□□□ -2.06
MMP3P08254 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
MMP3P08254 U4atac.1-201ENST00000618345 95 ntBASIC2.19□□□□□ -2.06
MMP3P08254 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
MMP3P08254 LINC02555-201ENST00000563933 1951 ntBASIC2.18□□□□□ -2.06
MMP3P08254 MIR340-201ENST00000362125 95 ntBASIC2.18□□□□□ -2.06
MMP3P08254 snoU2_19.2-201ENST00000363024 80 ntBASIC2.18□□□□□ -2.06
MMP3P08254 SNORD113-8-201ENST00000363497 74 ntBASIC2.18□□□□□ -2.06
MMP3P08254 U3.8-201ENST00000363675 217 ntBASIC2.18□□□□□ -2.06
MMP3P08254 RNU6-196P-201ENST00000384315 107 ntBASIC2.18□□□□□ -2.06
MMP3P08254 RNU1-148P-201ENST00000384472 162 ntBASIC2.18□□□□□ -2.06
MMP3P08254 Y_RNA.570-201ENST00000384750 101 ntBASIC2.18□□□□□ -2.06
MMP3P08254 AL445685.2-201ENST00000422551 342 ntBASIC2.18□□□□□ -2.06
MMP3P08254 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
MMP3P08254 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.18□□□□□ -2.06
MMP3P08254 CYCSP23-201ENST00000519781 313 ntBASIC2.18□□□□□ -2.06
MMP3P08254 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.18□□□□□ -2.06
MMP3P08254 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.18□□□□□ -2.06
MMP3P08254 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.18□□□□□ -2.06
MMP3P08254 MIR4503-201ENST00000582187 83 ntBASIC2.18□□□□□ -2.06
MMP3P08254 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
MMP3P08254 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
MMP3P08254 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
MMP3P08254 AC245060.5-201ENST00000610778 3293 ntBASIC2.18□□□□□ -2.06
MMP3P08254 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
MMP3P08254 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
MMP3P08254 Y_RNA.16-201ENST00000362421 102 ntBASIC2.17□□□□□ -2.06
MMP3P08254 Y_RNA.332-201ENST00000365271 113 ntBASIC2.17□□□□□ -2.06
MMP3P08254 Y_RNA.461-201ENST00000384263 103 ntBASIC2.17□□□□□ -2.06
MMP3P08254 Y_RNA.483-201ENST00000384380 101 ntBASIC2.17□□□□□ -2.06
MMP3P08254 RNU6-505P-201ENST00000384427 107 ntBASIC2.17□□□□□ -2.06
MMP3P08254 MT-TW-201ENST00000387382 68 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms