Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 U3.9-201ENST00000363823 204 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 RNU6-961P-201ENST00000363893 105 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 RNU6-20P-201ENST00000384106 107 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 RNU6-1026P-201ENST00000384465 108 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 RNU6-102P-201ENST00000384485 104 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 Y_RNA.515-201ENST00000384535 112 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 RNU6-21P-201ENST00000384710 107 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 MIR549A-201ENST00000385268 96 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.21□□□□□ -2.06
PKP4Q99569 Z98949.2-201ENST00000440996 144 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.21□□□□□ -2.06
PKP4Q99569 HSPE1P25-201ENST00000455484 251 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC091179.3-201ENST00000474761 144 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC145146.1-201ENST00000496370 254 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
PKP4Q99569 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC026271.5-201ENST00000577873 130 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 MZT1P2-201ENST00000604387 248 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC011373.1-201ENST00000607270 237 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC013412.1-201ENST00000610687 192 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 AC127459.3-201ENST00000624328 466 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PKP4Q99569 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
PKP4Q99569 RNU1-23P-201ENST00000363361 144 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RNA5SP126-201ENST00000365092 109 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 Y_RNA.570-201ENST00000384750 101 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 SNORA53-201ENST00000391141 249 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 AL033519.2-201ENST00000403958 392 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 UQCRBP2-201ENST00000447827 297 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RN7SL429P-201ENST00000479090 223 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RN7SL489P-201ENST00000486185 223 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RN7SL327P-201ENST00000488659 223 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 SERF1AP1-201ENST00000514575 187 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RNU7-110P-201ENST00000516891 62 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 SCARNA24.2-201ENST00000516968 130 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RRN3P3-201ENST00000549207 578 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.2□□□□□ -2.06
PKP4Q99569 AC007229.1-201ENST00000590455 412 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 AC005176.2-201ENST00000596933 147 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 RN7SL853P-201ENST00000617250 223 ntBASIC2.2□□□□□ -2.06
PKP4Q99569 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PKP4Q99569 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
PKP4Q99569 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PKP4Q99569 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PKP4Q99569 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 snoU2_19.1-201ENST00000362361 80 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 SNORD27-201ENST00000363981 72 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 RNU6-1175P-201ENST00000365200 107 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 AL603910.2-201ENST00000407268 136 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 RNU4-30P-201ENST00000410245 143 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 RNU4-53P-201ENST00000410828 140 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 RNU6-625P-201ENST00000459412 107 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 SNORA4.4-201ENST00000515921 135 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 RNU6-111P-201ENST00000517179 105 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 AC018448.1-201ENST00000552843 316 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 AC010900.2-201ENST00000604508 210 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 BX284668.6-201ENST00000606899 438 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 TCL6_2.1-201ENST00000615162 119 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 AC005562.2-201ENST00000618264 111 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.19□□□□□ -2.06
PKP4Q99569 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
PKP4Q99569 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKP4Q99569 AC008555.8-201ENST00000623602 2168 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 Y_RNA.286-201ENST00000364813 102 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 RNU6-326P-201ENST00000365480 107 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 Y_RNA.498-201ENST00000384460 102 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 MIR29B2-201ENST00000385055 81 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 MIR221-201ENST00000385135 110 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 MT-TR-201ENST00000387439 65 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PKP4Q99569 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.18□□□□□ -2.06
PKP4Q99569 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.18□□□□□ -2.06
PKP4Q99569 HMGB3P17-201ENST00000504195 649 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 AC018630.3-201ENST00000542637 96 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.18□□□□□ -2.06
PKP4Q99569 AL031274.2-201ENST00000599419 203 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 AL670379.2-201ENST00000604983 252 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 AC037487.3-201ENST00000606668 112 ntBASIC2.18□□□□□ -2.06
PKP4Q99569 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.18□□□□□ -2.06
PKP4Q99569 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKP4Q99569 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
PKP4Q99569 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
PKP4Q99569 Y_RNA.54-201ENST00000362766 105 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 RNU6-727P-201ENST00000363592 107 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 SNORA72.2-201ENST00000365028 127 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 Y_RNA.539-201ENST00000384635 107 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 SNORD58.1-201ENST00000391313 66 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 ELOCP21-201ENST00000412558 336 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 AC009310.1-201ENST00000414414 451 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 RAB28P5-201ENST00000427490 651 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 AC027124.2-201ENST00000428249 105 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms