Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 Y_RNA.431-201ENST00000384086 102 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 MIR23A-201ENST00000385245 73 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 FCF1P4-201ENST00000448326 183 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 RNU6-408P-201ENST00000515910 100 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 AP002001.1-203ENST00000534002 267 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 MIR3162-201ENST00000581818 82 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 C8orf59P2-201ENST00000603441 271 ntBASIC1.81□□□□□ -2.12
CMTM3Q96MX0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CMTM3Q96MX0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 RNU1-115P-201ENST00000365329 160 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 SNORA20B-201ENST00000384220 132 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 Y_RNA.496-201ENST00000384444 101 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 SNORD78.2-201ENST00000391076 69 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 RNU6-1186P-201ENST00000410429 97 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 MTCO3P19-201ENST00000415864 321 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 AL135786.1-201ENST00000415892 214 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 AC073910.1-201ENST00000445047 438 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
CMTM3Q96MX0 CHEK2P4-201ENST00000450340 246 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 AC010469.2-201ENST00000496412 480 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 AC025465.3-201ENST00000510570 311 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 RNU6-1012P-201ENST00000516606 109 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.8□□□□□ -2.12
CMTM3Q96MX0 AC006600.1-201ENST00000572529 153 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 MIR4272-201ENST00000635924 64 ntBASIC1.8□□□□□ -2.12
CMTM3Q96MX0 Y_RNA.27-201ENST00000362540 103 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 RNU6-454P-201ENST00000364292 107 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 RNU6-926P-201ENST00000384075 107 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 Y_RNA.509-201ENST00000384506 99 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CMTM3Q96MX0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CMTM3Q96MX0 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 AL355796.1-201ENST00000406706 323 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 FTH1P12-201ENST00000432137 551 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 RPS26P45-201ENST00000471748 340 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 RPS27P22-201ENST00000478056 241 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 RPL26P26-201ENST00000480251 434 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 RNU6-1170P-201ENST00000515974 106 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 AC027419.1-201ENST00000522976 328 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.79□□□□□ -2.12
CMTM3Q96MX0 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.79□□□□□ -2.12
CMTM3Q96MX0 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 MIR4438-201ENST00000585271 93 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 AC092447.9-201ENST00000603395 144 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 AC104985.2-201ENST00000620598 500 ntBASIC1.79□□□□□ -2.12
CMTM3Q96MX0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CMTM3Q96MX0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CMTM3Q96MX0 Y_RNA.39-201ENST00000362620 98 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 RNU6-961P-201ENST00000363893 105 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 SNORA67.3-201ENST00000384366 140 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AC018865.2-201ENST00000423631 129 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 MRPS10P1-201ENST00000448483 130 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AC108938.1-201ENST00000451204 136 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 SUMO1P2-201ENST00000452524 304 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.78□□□□□ -2.12
CMTM3Q96MX0 RNU7-128P-201ENST00000517247 62 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AC023157.2-201ENST00000540596 141 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 SNRPGP18-201ENST00000553000 214 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 AL138825.1-201ENST00000618587 192 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 U6.115-201ENST00000636045 103 ntBASIC1.78□□□□□ -2.12
CMTM3Q96MX0 RNU6-708P-201ENST00000384217 107 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.510-201ENST00000384511 114 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 MRPL35P1-201ENST00000404272 572 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.604-201ENST00000410574 102 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 AL445685.2-201ENST00000422551 342 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 AC005002.2-201ENST00000438228 269 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.77□□□□□ -2.13
CMTM3Q96MX0 MIR4659A-201ENST00000580269 81 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 MIR4435-1-201ENST00000582552 80 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.77□□□□□ -2.13
CMTM3Q96MX0 AL080274.1-201ENST00000605565 220 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 AC005828.6-201ENST00000606610 232 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 AC004467.1-201ENST00000615678 330 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 MTND5P6-201ENST00000422338 1798 ntBASIC1.77□□□□□ -2.13
CMTM3Q96MX0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CMTM3Q96MX0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CMTM3Q96MX0 ZNF72P-201ENST00000425869 1908 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
CMTM3Q96MX0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.76□□□□□ -2.13
CMTM3Q96MX0 SNORA27.1-201ENST00000362604 124 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 RNU6-271P-201ENST00000363858 105 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 339.1 ms