Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-1328P-201ENST00000410938 106 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 AC104332.1-201ENST00000440471 797 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 RN7SL499P-201ENST00000481141 276 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 SRIP1-201ENST00000489235 288 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.94□□□□□ -1.94
KRT40Q6A162 AC074198.2-201ENST00000508153 258 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 RNU6-436P-201ENST00000516171 114 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 RNY3P16-201ENST00000516338 101 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 Z83818.1-201ENST00000603584 150 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 AC005828.6-201ENST00000606610 232 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
KRT40Q6A162 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.94□□□□□ -1.94
KRT40Q6A162 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRT40Q6A162 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRT40Q6A162 AC091564.4-201ENST00000533934 2194 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.93□□□□□ -1.94
KRT40Q6A162 RNU6-1310P-201ENST00000384153 107 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 RNU4-61P-201ENST00000411243 107 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.93□□□□□ -1.94
KRT40Q6A162 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.93□□□□□ -1.94
KRT40Q6A162 AL135790.2-201ENST00000437701 267 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 Y_RNA.679-201ENST00000516416 91 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 RNU6-861P-201ENST00000516745 106 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 RNU6-255P-201ENST00000516957 105 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 RPL30P11-203ENST00000598995 310 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.93□□□□□ -1.94
KRT40Q6A162 AL008718.3-201ENST00000610217 321 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 AC008873.1-201ENST00000625051 138 ntBASIC2.93□□□□□ -1.94
KRT40Q6A162 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.93□□□□□ -1.94
KRT40Q6A162 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
KRT40Q6A162 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.92□□□□□ -1.94
KRT40Q6A162 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KRT40Q6A162 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.92□□□□□ -1.94
KRT40Q6A162 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRT40Q6A162 Y_RNA.329-201ENST00000365209 107 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 CD24P4-201ENST00000382840 243 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 RNU6-918P-201ENST00000391219 106 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 Y_RNA.597-201ENST00000410463 100 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 RNA5SP475-201ENST00000410568 110 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
KRT40Q6A162 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.92□□□□□ -1.94
KRT40Q6A162 RNU6-107P-201ENST00000516643 102 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.92□□□□□ -1.94
KRT40Q6A162 AC087441.2-201ENST00000529141 262 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.92□□□□□ -1.94
KRT40Q6A162 AC103810.1-201ENST00000579873 453 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 MIR4308-201ENST00000580634 81 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 MIR4765-201ENST00000585007 77 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 AL512605.2-201ENST00000592972 256 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 AC073349.3-201ENST00000617616 186 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 UCA1.1-201ENST00000620952 75 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 snoU18.1-201ENST00000629629 71 ntBASIC2.92□□□□□ -1.94
KRT40Q6A162 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.92□□□□□ -1.94
KRT40Q6A162 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRT40Q6A162 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
KRT40Q6A162 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRT40Q6A162 RNU6-545P-201ENST00000362681 104 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 SNORD115-30-201ENST00000364117 82 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 RNA5SP354-201ENST00000391247 136 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 U3.40-201ENST00000408706 208 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 RN7SKP51-201ENST00000410781 304 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 RPL23AP58-201ENST00000440453 469 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 AC108210.2-201ENST00000503681 201 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 RAC1P5-201ENST00000512182 576 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 RNU6-991P-201ENST00000516168 107 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.91□□□□□ -1.94
KRT40Q6A162 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.91□□□□□ -1.94
KRT40Q6A162 AC010620.2-201ENST00000600135 313 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 MIR7111-201ENST00000619751 72 ntBASIC2.91□□□□□ -1.94
KRT40Q6A162 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
KRT40Q6A162 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
KRT40Q6A162 AC068700.1-201ENST00000565862 3754 ntBASIC2.9□□□□□ -1.94
KRT40Q6A162 RNU6-1272P-201ENST00000362776 107 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6-774P-201ENST00000363238 107 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6-923P-201ENST00000364753 107 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6-211P-201ENST00000384047 107 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 Y_RNA.464-201ENST00000384282 110 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 MIR548B-201ENST00000385247 97 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6-1098P-201ENST00000516772 96 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6-1212P-201ENST00000517023 104 ntBASIC2.9□□□□□ -1.95
KRT40Q6A162 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRT40Q6A162 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.9□□□□□ -1.95
KRT40Q6A162 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KRT40Q6A162 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
KRT40Q6A162 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRT40Q6A162 RNU6-653P-201ENST00000363074 106 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 RNU6-1020P-201ENST00000363684 107 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 RNU6-944P-201ENST00000364023 107 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 RNU6-1274P-201ENST00000384557 107 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 MIR548M-201ENST00000408260 86 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT40Q6A162 Y_RNA.637-201ENST00000459424 114 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 MIR449C-201ENST00000516047 92 ntBASIC2.89□□□□□ -1.95
KRT40Q6A162 RNA5SP320-201ENST00000516263 124 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms