Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 MIR4277-201ENST00000578298 84 ntBASIC4.7□□□□□ -1.66
PSEN1P49768 CR392039.5-201ENST00000623201 510 ntBASIC4.7□□□□□ -1.66
PSEN1P49768 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
PSEN1P49768 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PSEN1P49768 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PSEN1P49768 AC015813.6-201ENST00000624409 5808 ntBASIC4.7□□□□□ -1.66
PSEN1P49768 SNORD116-10-201ENST00000363791 102 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 SNORD38C-201ENST00000384381 69 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 AC009969.1-201ENST00000438726 172 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 PHBP14-201ENST00000512887 367 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 RNU1-142P-201ENST00000516682 145 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 MIR3186-201ENST00000577404 85 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 U7.8-201ENST00000619968 63 ntBASIC4.69□□□□□ -1.66
PSEN1P49768 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PSEN1P49768 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PSEN1P49768 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PSEN1P49768 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PSEN1P49768 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PSEN1P49768 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PSEN1P49768 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PSEN1P49768 Y_RNA.4-201ENST00000362333 112 ntBASIC4.68□□□□□ -1.66
PSEN1P49768 U8.5-201ENST00000364528 136 ntBASIC4.68□□□□□ -1.66
PSEN1P49768 Y_RNA.336-201ENST00000365307 109 ntBASIC4.68□□□□□ -1.66
PSEN1P49768 RNU2-40P-201ENST00000410833 196 ntBASIC4.68□□□□□ -1.66
PSEN1P49768 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.68□□□□□ -1.66
PSEN1P49768 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PSEN1P49768 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PSEN1P49768 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.68□□□□□ -1.66
PSEN1P49768 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
PSEN1P49768 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
PSEN1P49768 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.67□□□□□ -1.66
PSEN1P49768 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PSEN1P49768 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PSEN1P49768 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PSEN1P49768 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PSEN1P49768 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PSEN1P49768 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
PSEN1P49768 RNU6-1201P-201ENST00000384227 107 ntBASIC4.67□□□□□ -1.66
PSEN1P49768 RNU4-69P-201ENST00000410677 143 ntBASIC4.67□□□□□ -1.66
PSEN1P49768 AC091905.2-201ENST00000623143 306 ntBASIC4.67□□□□□ -1.66
PSEN1P49768 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.67□□□□□ -1.66
PSEN1P49768 U6.108-201ENST00000637764 58 ntBASIC4.67□□□□□ -1.66
PSEN1P49768 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PSEN1P49768 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PSEN1P49768 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.66□□□□□ -1.66
PSEN1P49768 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.66□□□□□ -1.66
PSEN1P49768 MIR340-201ENST00000362125 95 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 RNA5SP509-201ENST00000364577 119 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 Y_RNA.607-201ENST00000410597 98 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.66□□□□□ -1.66
PSEN1P49768 RNU7-94P-201ENST00000459576 63 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 RN7SL98P-201ENST00000462271 300 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 RN7SL303P-201ENST00000469773 251 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 RN7SL812P-201ENST00000493791 279 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 RNA5SP446-201ENST00000515955 82 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 SNORD45.4-201ENST00000516629 73 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 MIR378J-201ENST00000611988 109 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 AC006111.3-201ENST00000622137 383 ntBASIC4.66□□□□□ -1.66
PSEN1P49768 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PSEN1P49768 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.66□□□□□ -1.66
PSEN1P49768 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PSEN1P49768 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PSEN1P49768 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.65□□□□□ -1.66
PSEN1P49768 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
PSEN1P49768 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PSEN1P49768 SNORA62-201ENST00000365493 153 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.65□□□□□ -1.67
PSEN1P49768 RPS29P17-201ENST00000430795 166 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PSEN1P49768 AC079587.1-201ENST00000603846 277 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 AC096720.1-201ENST00000604441 183 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 MIR6798-201ENST00000612887 67 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 uc_338.13-201ENST00000618243 179 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 MIR6891-201ENST00000618788 93 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PSEN1P49768 AC021613.1-201ENST00000623880 111 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 MIR548BB-201ENST00000626714 66 ntBASIC4.65□□□□□ -1.67
PSEN1P49768 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.65□□□□□ -1.67
PSEN1P49768 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.65□□□□□ -1.67
PSEN1P49768 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PSEN1P49768 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.64□□□□□ -1.67
PSEN1P49768 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PSEN1P49768 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PSEN1P49768 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PSEN1P49768 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PSEN1P49768 SNORA11F-201ENST00000408237 128 ntBASIC4.64□□□□□ -1.67
PSEN1P49768 RNU2-37P-201ENST00000410695 177 ntBASIC4.64□□□□□ -1.67
PSEN1P49768 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.64□□□□□ -1.67
PSEN1P49768 PHBP16-201ENST00000446318 950 ntBASIC4.64□□□□□ -1.67
PSEN1P49768 MIR5047-201ENST00000579212 100 ntBASIC4.64□□□□□ -1.67
PSEN1P49768 MIR4439-201ENST00000583746 80 ntBASIC4.64□□□□□ -1.67
PSEN1P49768 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PSEN1P49768 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms