Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC005609.4-201ENST00000625071 447 ntBASIC0.21□□□□□ -2.38
UBBP0CG47 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.21□□□□□ -2.38
UBBP0CG47 SNORD115-32-201ENST00000364079 82 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 MIR320B2-201ENST00000408479 138 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 MIR548J-201ENST00000408833 112 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.2□□□□□ -2.38
UBBP0CG47 Z82188.1-201ENST00000436709 154 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.2□□□□□ -2.38
UBBP0CG47 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.2□□□□□ -2.38
UBBP0CG47 MTND4P18-201ENST00000447010 465 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AC091021.1-201ENST00000468051 388 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.2□□□□□ -2.38
UBBP0CG47 RNU7-28P-201ENST00000516759 62 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 RNU6-341P-201ENST00000516973 96 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 MIR151B-201ENST00000584249 96 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 MIR4298-201ENST00000584380 73 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AC234772.3-201ENST00000602277 528 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 RNU6-94P-201ENST00000607728 107 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AC087683.2-201ENST00000611384 326 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 AC007014.2-201ENST00000615581 479 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 7SK.10-201ENST00000621414 298 ntBASIC0.2□□□□□ -2.38
UBBP0CG47 RNU6-873P-201ENST00000363833 107 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 Y_RNA.191-201ENST00000363972 113 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 Y_RNA.265-201ENST00000364677 108 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 RNU5A-5P-201ENST00000411054 116 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 RNU6-177P-201ENST00000411257 104 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 MTCO3P19-201ENST00000415864 321 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 MTND2P18-201ENST00000419962 1030 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.19□□□□□ -2.38
UBBP0CG47 MTCO2P16-201ENST00000436962 677 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AL359672.1-201ENST00000442302 409 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 RNU7-125P-201ENST00000458760 62 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 MTCO3P38-201ENST00000468910 766 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.19□□□□□ -2.38
UBBP0CG47 RNU7-12P-201ENST00000516030 62 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 RNU6-496P-201ENST00000516145 99 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 RNU6-58P-201ENST00000517143 103 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 RNU6-1116P-201ENST00000517269 99 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC087854.1-201ENST00000519706 414 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.19□□□□□ -2.38
UBBP0CG47 MTND4P7-201ENST00000523876 130 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC036111.3-201ENST00000526389 112 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC005014.3-201ENST00000605985 190 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC016597.2-201ENST00000613256 341 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 MIR6513-201ENST00000621188 64 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 AC100810.6-201ENST00000638068 285 ntBASIC0.19□□□□□ -2.38
UBBP0CG47 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
UBBP0CG47 MIR103A2-201ENST00000362154 78 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 RNU6-82P-201ENST00000363970 107 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 RNU6-996P-201ENST00000365438 107 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 RNU6-1158P-201ENST00000391167 107 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 RNA5SP482-201ENST00000391269 118 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 AL358934.1-201ENST00000432346 324 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 Z98949.2-201ENST00000440996 144 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 AC093019.1-201ENST00000443135 252 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.18□□□□□ -2.38
UBBP0CG47 AC010469.2-201ENST00000496412 480 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 AP002004.2-201ENST00000531656 154 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
UBBP0CG47 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.18□□□□□ -2.38
UBBP0CG47 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.18□□□□□ -2.38
UBBP0CG47 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.18□□□□□ -2.38
UBBP0CG47 AL133215.3-201ENST00000609801 448 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 AF246928.1-201ENST00000623768 87 ntBASIC0.18□□□□□ -2.38
UBBP0CG47 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
UBBP0CG47 RNU6-1266P-201ENST00000362794 105 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 RNU6-833P-201ENST00000363486 107 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 Y_RNA.330-201ENST00000365230 109 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 RNY3P9-201ENST00000384727 106 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 RNU6-1067P-201ENST00000384752 107 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AL390237.1-201ENST00000404226 1415 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 MIR1827-201ENST00000408549 66 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 MIR1302-7-201ENST00000408841 72 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AL353193.1-201ENST00000421444 268 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.17□□□□□ -2.38
UBBP0CG47 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.17□□□□□ -2.38
UBBP0CG47 MTND2P39-201ENST00000457230 764 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 RNU7-63P-201ENST00000459054 62 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AC107401.1-201ENST00000503426 685 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AC010598.1-201ENST00000510378 103 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.17□□□□□ -2.38
UBBP0CG47 RNU7-41P-201ENST00000515917 61 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 RNU2-56P-201ENST00000516826 190 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AC091144.1-201ENST00000519573 138 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AC011195.1-201ENST00000578177 177 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 MIR3915-201ENST00000578518 97 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AC087683.1-201ENST00000591187 441 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AC007684.1-201ENST00000609671 477 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 AL121757.2-201ENST00000611223 313 ntBASIC0.17□□□□□ -2.38
UBBP0CG47 RNU6-369P-201ENST00000362515 102 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 SNORA25.3-201ENST00000363205 127 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 RNU6-727P-201ENST00000363592 107 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 Y_RNA.319-201ENST00000365138 92 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 RNU4-20P-201ENST00000365601 151 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 Y_RNA.378-201ENST00000365652 113 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 RNU6-1297P-201ENST00000384415 104 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms