Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR5190-201ENST00000581537 80 ntBASIC-0.21□□□□□ -2.44
CXCL1P09341 AC010999.1-201ENST00000611856 324 ntBASIC-0.21□□□□□ -2.44
CXCL1P09341 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.21□□□□□ -2.44
CXCL1P09341 MIR6515-201ENST00000619843 57 ntBASIC-0.21□□□□□ -2.44
CXCL1P09341 RNU6-222P-201ENST00000362438 107 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
CXCL1P09341 RNA5SP496-201ENST00000391240 109 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.22□□□□□ -2.44
CXCL1P09341 GPR143P-201ENST00000434155 205 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 PCNPP5-201ENST00000452246 481 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 SCARNA18-201ENST00000459004 134 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.22□□□□□ -2.44
CXCL1P09341 RNU7-43P-201ENST00000516554 64 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.22□□□□□ -2.44
CXCL1P09341 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.22□□□□□ -2.44
CXCL1P09341 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 MIR3124-201ENST00000582636 67 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 MIR4999-201ENST00000585029 91 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 AC006927.3-201ENST00000638789 384 ntBASIC-0.22□□□□□ -2.44
CXCL1P09341 SNORD114-26-201ENST00000363543 72 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 SNORD115-8-201ENST00000363856 82 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 RNU6-654P-201ENST00000364373 107 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 SNORD115-38-201ENST00000365037 82 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 RNU6-108P-201ENST00000365558 107 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 SNORA2B-201ENST00000384583 137 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 MIR598-201ENST00000384868 97 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 MIR520G-201ENST00000385064 90 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 MIR520H-201ENST00000385126 88 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 MIR1302-7-201ENST00000408841 72 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.23□□□□□ -2.45
CXCL1P09341 ZNF885P-201ENST00000420174 1098 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 MRPS10P2-201ENST00000431226 381 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.23□□□□□ -2.45
CXCL1P09341 Z98949.2-201ENST00000440996 144 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 USP9YP12-201ENST00000450481 570 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AC091021.1-201ENST00000468051 388 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
CXCL1P09341 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.23□□□□□ -2.45
CXCL1P09341 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.23□□□□□ -2.45
CXCL1P09341 AC010598.1-201ENST00000510378 103 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 RPL39P5-202ENST00000512505 151 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 SNORA40.12-201ENST00000516329 111 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 RNU7-172P-201ENST00000517125 64 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
CXCL1P09341 AC023157.2-201ENST00000540596 141 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.23□□□□□ -2.45
CXCL1P09341 AC120024.3-201ENST00000603167 156 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AL133173.2-201ENST00000614270 90 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 AL138960.2-201ENST00000625145 535 ntBASIC-0.23□□□□□ -2.45
CXCL1P09341 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.24□□□□□ -2.45
CXCL1P09341 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 MIR15B-201ENST00000385045 98 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 SNORD83.1-201ENST00000411362 77 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.24□□□□□ -2.45
CXCL1P09341 MTND1P4-201ENST00000435196 415 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 AL512286.1-201ENST00000439244 400 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 MTND2P31-201ENST00000512602 616 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 RNU2-46P-201ENST00000517038 113 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 MIR4764-201ENST00000580680 88 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 AC104408.1-201ENST00000605241 170 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 RMST_3.1-201ENST00000611651 109 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 uc_338.16-201ENST00000621804 95 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 AC068137.4-201ENST00000638485 296 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 MTND4P9-201ENST00000507819 1346 ntBASIC-0.24□□□□□ -2.45
CXCL1P09341 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 SNORD14.1-201ENST00000365609 90 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 RNA5SP63-201ENST00000391225 112 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.25□□□□□ -2.45
CXCL1P09341 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.25□□□□□ -2.45
CXCL1P09341 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.25□□□□□ -2.45
CXCL1P09341 RNU7-138P-201ENST00000459479 64 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 U8.21-201ENST00000459536 136 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 AC105417.1-201ENST00000514691 285 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 AL355073.2-201ENST00000612106 557 ntBASIC-0.25□□□□□ -2.45
CXCL1P09341 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.25□□□□□ -2.45
CXCL1P09341 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CXCL1P09341 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 RNU4-41P-201ENST00000364426 143 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 SNORD87-201ENST00000364849 89 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 AL590632.1-201ENST00000424289 371 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 MTND3P9-201ENST00000429526 346 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 SEPT7P4-201ENST00000437076 306 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 RPS29P15-201ENST00000458329 171 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 RNA5SP94-201ENST00000516917 108 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 AC093027.1-201ENST00000546698 429 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 AC087683.1-201ENST00000591187 441 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 AC027807.2-201ENST00000616099 408 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 AC091925.1-201ENST00000623204 462 ntBASIC-0.26□□□□□ -2.45
CXCL1P09341 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.26□□□□□ -2.45
CXCL1P09341 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms