Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
KLF4O43474 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KLF4O43474 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
KLF4O43474 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
KLF4O43474 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
KLF4O43474 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.92□□□□□ -1.94
KLF4O43474 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KLF4O43474 AL356292.1-201ENST00000283110 373 ntBASIC2.92□□□□□ -1.94
KLF4O43474 RNU6-801P-201ENST00000364087 105 ntBASIC2.92□□□□□ -1.94
KLF4O43474 SNORD114-6-201ENST00000364393 72 ntBASIC2.92□□□□□ -1.94
KLF4O43474 Y_RNA.297-201ENST00000364950 91 ntBASIC2.92□□□□□ -1.94
KLF4O43474 RNY4P28-201ENST00000365281 93 ntBASIC2.92□□□□□ -1.94
KLF4O43474 RNU6-376P-201ENST00000384731 106 ntBASIC2.92□□□□□ -1.94
KLF4O43474 RNU6-907P-201ENST00000390924 102 ntBASIC2.92□□□□□ -1.94
KLF4O43474 MTCO2P33-201ENST00000402100 465 ntBASIC2.92□□□□□ -1.94
KLF4O43474 NDUFB4P4-201ENST00000404822 243 ntBASIC2.92□□□□□ -1.94
KLF4O43474 RNU2-14P-201ENST00000411053 191 ntBASIC2.92□□□□□ -1.94
KLF4O43474 Y_RNA.626-201ENST00000411288 95 ntBASIC2.92□□□□□ -1.94
KLF4O43474 RPL32P35-201ENST00000415214 394 ntBASIC2.92□□□□□ -1.94
KLF4O43474 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.92□□□□□ -1.94
KLF4O43474 AC018634.1-201ENST00000437554 401 ntBASIC2.92□□□□□ -1.94
KLF4O43474 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.92□□□□□ -1.94
KLF4O43474 RN7SL504P-201ENST00000494496 287 ntBASIC2.92□□□□□ -1.94
KLF4O43474 AC097462.1-201ENST00000514125 324 ntBASIC2.92□□□□□ -1.94
KLF4O43474 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.92□□□□□ -1.94
KLF4O43474 MIR2682-201ENST00000580305 110 ntBASIC2.92□□□□□ -1.94
KLF4O43474 Z83818.1-201ENST00000603584 150 ntBASIC2.92□□□□□ -1.94
KLF4O43474 AC013791.1-201ENST00000616619 62 ntBASIC2.92□□□□□ -1.94
KLF4O43474 AC068647.2-201ENST00000637380 353 ntBASIC2.92□□□□□ -1.94
KLF4O43474 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KLF4O43474 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
KLF4O43474 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.91□□□□□ -1.94
KLF4O43474 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
KLF4O43474 AC008264.2-201ENST00000610193 3731 ntBASIC2.91□□□□□ -1.94
KLF4O43474 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
KLF4O43474 RNU1-58P-201ENST00000362413 163 ntBASIC2.91□□□□□ -1.94
KLF4O43474 Y_RNA.29-201ENST00000362570 113 ntBASIC2.91□□□□□ -1.94
KLF4O43474 RNU1-22P-201ENST00000363334 158 ntBASIC2.91□□□□□ -1.94
KLF4O43474 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
KLF4O43474 MIR128-1-201ENST00000384921 82 ntBASIC2.91□□□□□ -1.94
KLF4O43474 RNA5SP323-201ENST00000391094 133 ntBASIC2.91□□□□□ -1.94
KLF4O43474 RNU6-651P-201ENST00000411040 105 ntBASIC2.91□□□□□ -1.94
KLF4O43474 MTND5P15-201ENST00000434246 349 ntBASIC2.91□□□□□ -1.94
KLF4O43474 AC006028.1-201ENST00000438379 402 ntBASIC2.91□□□□□ -1.94
KLF4O43474 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.91□□□□□ -1.94
KLF4O43474 Y_RNA.637-201ENST00000459424 114 ntBASIC2.91□□□□□ -1.94
KLF4O43474 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.91□□□□□ -1.94
KLF4O43474 RNU1-142P-201ENST00000516682 145 ntBASIC2.91□□□□□ -1.94
KLF4O43474 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.91□□□□□ -1.94
KLF4O43474 MIR5692C2-201ENST00000577959 77 ntBASIC2.91□□□□□ -1.94
KLF4O43474 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.91□□□□□ -1.94
KLF4O43474 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.9□□□□□ -1.94
KLF4O43474 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KLF4O43474 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RNU6-1164P-201ENST00000364428 107 ntBASIC2.9□□□□□ -1.95
KLF4O43474 Y_RNA.304-201ENST00000365011 112 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RNU6-144P-201ENST00000383951 107 ntBASIC2.9□□□□□ -1.95
KLF4O43474 Y_RNA.785-201ENST00000384290 109 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RNU6-1186P-201ENST00000410429 97 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RN7SKP58-201ENST00000411010 305 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RNA5SP270-201ENST00000411361 118 ntBASIC2.9□□□□□ -1.95
KLF4O43474 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.9□□□□□ -1.95
KLF4O43474 CST2P1-201ENST00000425770 87 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RN7SL75P-201ENST00000461926 281 ntBASIC2.9□□□□□ -1.95
KLF4O43474 SNORD116-28-201ENST00000516123 91 ntBASIC2.9□□□□□ -1.95
KLF4O43474 RNA5SP380-201ENST00000517190 98 ntBASIC2.9□□□□□ -1.95
KLF4O43474 MIR5004-201ENST00000579078 107 ntBASIC2.9□□□□□ -1.95
KLF4O43474 LARP7P3-201ENST00000579888 337 ntBASIC2.9□□□□□ -1.95
KLF4O43474 AL008718.3-201ENST00000610217 321 ntBASIC2.9□□□□□ -1.95
KLF4O43474 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.9□□□□□ -1.95
KLF4O43474 MIR338-201ENST00000636369 67 ntBASIC2.9□□□□□ -1.95
KLF4O43474 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.9□□□□□ -1.95
KLF4O43474 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
KLF4O43474 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
KLF4O43474 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KLF4O43474 RNA5SP374-201ENST00000362939 125 ntBASIC2.89□□□□□ -1.95
KLF4O43474 RNU6-1205P-201ENST00000363625 106 ntBASIC2.89□□□□□ -1.95
KLF4O43474 Y_RNA.293-201ENST00000364908 93 ntBASIC2.89□□□□□ -1.95
KLF4O43474 RNU6-1323P-201ENST00000384025 107 ntBASIC2.89□□□□□ -1.95
KLF4O43474 SNORA26.5-201ENST00000391215 123 ntBASIC2.89□□□□□ -1.95
KLF4O43474 AL355497.1-201ENST00000406262 551 ntBASIC2.89□□□□□ -1.95
KLF4O43474 Y_RNA.793-201ENST00000411222 111 ntBASIC2.89□□□□□ -1.95
KLF4O43474 YWHAEP4-201ENST00000505390 198 ntBASIC2.89□□□□□ -1.95
KLF4O43474 RNU7-99P-201ENST00000516271 62 ntBASIC2.89□□□□□ -1.95
KLF4O43474 AC005786.1-201ENST00000588553 154 ntBASIC2.89□□□□□ -1.95
KLF4O43474 uc_338.25-201ENST00000613756 156 ntBASIC2.89□□□□□ -1.95
KLF4O43474 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.89□□□□□ -1.95
KLF4O43474 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KLF4O43474 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KLF4O43474 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.89□□□□□ -1.95
KLF4O43474 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KLF4O43474 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.89□□□□□ -1.95
KLF4O43474 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLF4O43474 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLF4O43474 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.88□□□□□ -1.95
KLF4O43474 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KLF4O43474 MIR411-201ENST00000362239 96 ntBASIC2.88□□□□□ -1.95
KLF4O43474 RNU4-47P-201ENST00000410876 114 ntBASIC2.88□□□□□ -1.95
KLF4O43474 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.88□□□□□ -1.95
KLF4O43474 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 284.4 ms