Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL160004.2-201ENST00000432935 350 ntBASIC1.7□□□□□ -2.14
PHF1O43189 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.7□□□□□ -2.14
PHF1O43189 NDUFB4P10-201ENST00000452541 359 ntBASIC1.7□□□□□ -2.14
PHF1O43189 RNU7-169P-201ENST00000459456 61 ntBASIC1.7□□□□□ -2.14
PHF1O43189 RPL23AP63-201ENST00000498752 471 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.7□□□□□ -2.14
PHF1O43189 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
PHF1O43189 CYCSP23-201ENST00000519781 313 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AC093023.1-201ENST00000547375 507 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AK6P2-201ENST00000549020 471 ntBASIC1.7□□□□□ -2.14
PHF1O43189 MIR5695-201ENST00000579717 85 ntBASIC1.7□□□□□ -2.14
PHF1O43189 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AC104695.3-201ENST00000604052 296 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AC010999.1-201ENST00000611856 324 ntBASIC1.7□□□□□ -2.14
PHF1O43189 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AC010205.1-201ENST00000616668 449 ntBASIC1.7□□□□□ -2.14
PHF1O43189 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PHF1O43189 AC008555.8-201ENST00000623602 2168 ntBASIC1.69□□□□□ -2.14
PHF1O43189 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
PHF1O43189 Y_RNA.422-201ENST00000384054 114 ntBASIC1.69□□□□□ -2.14
PHF1O43189 MRPL35P1-201ENST00000404272 572 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AL590004.1-201ENST00000405321 300 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AL445305.1-201ENST00000432577 575 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AC009238.1-201ENST00000442165 424 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AC009237.6-201ENST00000446969 424 ntBASIC1.69□□□□□ -2.14
PHF1O43189 RPL26P26-201ENST00000480251 434 ntBASIC1.69□□□□□ -2.14
PHF1O43189 RPS23P5-201ENST00000495419 428 ntBASIC1.69□□□□□ -2.14
PHF1O43189 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.69□□□□□ -2.14
PHF1O43189 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
PHF1O43189 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
PHF1O43189 SCARNA15.1-201ENST00000516384 125 ntBASIC1.69□□□□□ -2.14
PHF1O43189 Y_RNA.683-201ENST00000516508 93 ntBASIC1.69□□□□□ -2.14
PHF1O43189 RNU6-965P-201ENST00000516721 96 ntBASIC1.69□□□□□ -2.14
PHF1O43189 RNA5SP137-201ENST00000516833 135 ntBASIC1.69□□□□□ -2.14
PHF1O43189 RNU6-1137P-201ENST00000517073 99 ntBASIC1.69□□□□□ -2.14
PHF1O43189 RNU6-667P-201ENST00000517186 102 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AC022616.4-201ENST00000522985 181 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AC087441.2-201ENST00000529141 262 ntBASIC1.69□□□□□ -2.14
PHF1O43189 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.69□□□□□ -2.14
PHF1O43189 MIR5006-201ENST00000583027 110 ntBASIC1.69□□□□□ -2.14
PHF1O43189 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
PHF1O43189 MZT1P2-201ENST00000604387 248 ntBASIC1.69□□□□□ -2.14
PHF1O43189 SNORD11B-201ENST00000607707 90 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AL357075.2-201ENST00000614906 189 ntBASIC1.69□□□□□ -2.14
PHF1O43189 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.69□□□□□ -2.14
PHF1O43189 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AC068205.3-201ENST00000636385 468 ntBASIC1.69□□□□□ -2.14
PHF1O43189 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.69□□□□□ -2.14
PHF1O43189 AC091812.1-201ENST00000432235 1948 ntBASIC1.69□□□□□ -2.14
PHF1O43189 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PHF1O43189 MIR340-201ENST00000362125 95 ntBASIC1.68□□□□□ -2.14
PHF1O43189 MIR410-201ENST00000362222 80 ntBASIC1.68□□□□□ -2.14
PHF1O43189 Y_RNA.179-201ENST00000363844 90 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
PHF1O43189 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
PHF1O43189 SNORA63C-201ENST00000364578 129 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU6-639P-201ENST00000384074 107 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU6-708P-201ENST00000384217 107 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU6-1160P-201ENST00000384546 104 ntBASIC1.68□□□□□ -2.14
PHF1O43189 Y_RNA.526-201ENST00000384572 110 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU6-823P-201ENST00000391042 103 ntBASIC1.68□□□□□ -2.14
PHF1O43189 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
PHF1O43189 MIR1283-1-201ENST00000408494 87 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU2-2P-201ENST00000410396 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.68□□□□□ -2.14
PHF1O43189 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.68□□□□□ -2.14
PHF1O43189 RPL23AP3-201ENST00000453844 468 ntBASIC1.68□□□□□ -2.14
PHF1O43189 HMGN2P9-201ENST00000476875 229 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC010469.2-201ENST00000496412 480 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC093259.1-201ENST00000509755 300 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC022868.1-201ENST00000517767 391 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC233702.2-202ENST00000562547 291 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.15-201ENST00000611544 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.16-201ENST00000613119 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.12-201ENST00000613778 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC040896.1-201ENST00000613819 479 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.20-201ENST00000613956 192 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.9-201ENST00000615427 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.11-201ENST00000616345 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.2-201ENST00000616535 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.3-201ENST00000617785 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.19-201ENST00000618602 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU2-1-201ENST00000618664 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.6-201ENST00000619225 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.5-201ENST00000619465 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U2.10-201ENST00000620268 191 ntBASIC1.68□□□□□ -2.14
PHF1O43189 U6.92-201ENST00000636464 89 ntBASIC1.68□□□□□ -2.14
PHF1O43189 AC009487.4-201ENST00000624969 3585 ntBASIC1.68□□□□□ -2.14
PHF1O43189 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
PHF1O43189 MTND5P35-201ENST00000557537 1720 ntBASIC1.68□□□□□ -2.14
PHF1O43189 RNU6-738P-201ENST00000384531 106 ntBASIC1.67□□□□□ -2.14
PHF1O43189 MIR628-201ENST00000385229 95 ntBASIC1.67□□□□□ -2.14
PHF1O43189 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
PHF1O43189 SNORD78.2-201ENST00000391076 69 ntBASIC1.67□□□□□ -2.14
PHF1O43189 MIR300-201ENST00000401138 83 ntBASIC1.67□□□□□ -2.14
PHF1O43189 AL357139.1-201ENST00000407792 426 ntBASIC1.67□□□□□ -2.14
PHF1O43189 ELOCP21-201ENST00000412558 336 ntBASIC1.67□□□□□ -2.14
PHF1O43189 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
PHF1O43189 AL353689.1-201ENST00000438895 199 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms