Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RPL23AP3-201ENST00000453844 468 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 RNU6-408P-201ENST00000515910 100 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 RNU6-1012P-201ENST00000516606 109 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 Y_RNA.701-201ENST00000516812 110 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 HSBP1P1-201ENST00000555205 166 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 AC011476.5-201ENST00000615594 130 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 AC134503.1-201ENST00000633048 54 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 AC091812.1-201ENST00000432235 1948 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 Y_RNA.11-201ENST00000362375 109 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 SNORA16.1-201ENST00000364597 132 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 SNORD78.2-201ENST00000391076 69 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 AL354751.2-201ENST00000415471 210 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 MTCO3P19-201ENST00000415864 321 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2□□□□□ -2.09
LRRC53A6NM62 TOMM22P2-201ENST00000430735 237 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2□□□□□ -2.09
LRRC53A6NM62 TRAPPC2P8-201ENST00000440676 396 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 FCF1P4-201ENST00000448326 183 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 RPL26P26-201ENST00000480251 434 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 RNU6-1153P-201ENST00000516760 105 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 MIR5094-201ENST00000578766 85 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 MIR4659A-201ENST00000580269 81 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 MIR338-201ENST00000636369 67 ntBASIC2□□□□□ -2.09
LRRC53A6NM62 Y_RNA.148-201ENST00000363557 117 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 Y_RNA.287-201ENST00000364853 94 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 RNU6-1240P-201ENST00000365155 104 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 AC008134.1-201ENST00000420943 193 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 HMGN2P34-201ENST00000437647 269 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 SNORA40.14-201ENST00000516543 86 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC53A6NM62 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.99□□□□□ -2.09
LRRC53A6NM62 MIR4513-201ENST00000581077 86 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 AL138825.1-201ENST00000618587 192 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 MIR3674-201ENST00000636576 68 ntBASIC1.99□□□□□ -2.09
LRRC53A6NM62 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LRRC53A6NM62 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LRRC53A6NM62 Y_RNA.28-201ENST00000362554 111 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 snoU2-30.2-201ENST00000362805 70 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 Y_RNA.216-201ENST00000364205 93 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 MIR1253-201ENST00000408273 105 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 MIR548P-201ENST00000408336 84 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.98□□□□□ -2.09
LRRC53A6NM62 AC112492.4-201ENST00000456549 352 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC53A6NM62 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC53A6NM62 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC53A6NM62 AC020661.2-201ENST00000560114 134 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 AC055872.1-201ENST00000570978 278 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 MIR4435-1-201ENST00000582552 80 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 AC240442.1-201ENST00000616055 283 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
LRRC53A6NM62 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LRRC53A6NM62 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
LRRC53A6NM62 MIR410-201ENST00000362222 80 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 SNORA33-201ENST00000363664 130 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 RNU6-454P-201ENST00000364292 107 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 RNA5SP475-201ENST00000410568 110 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 MTND1P14-201ENST00000427400 950 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC53A6NM62 SNORA25.10-201ENST00000515926 124 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC53A6NM62 SUB1P4-201ENST00000566062 339 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 MIR3171-201ENST00000584270 74 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC53A6NM62 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 AC091932.3-201ENST00000624223 323 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 AC005592.1-201ENST00000566527 1640 ntBASIC1.97□□□□□ -2.09
LRRC53A6NM62 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LRRC53A6NM62 SNORA22B-201ENST00000383876 138 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 MRPL35P1-201ENST00000404272 572 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 MIR1302-11-201ENST00000408051 138 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 MIR1302-9-201ENST00000408365 138 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 MIR1302-10-201ENST00000408734 138 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 SDAD1P3-201ENST00000427380 333 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC53A6NM62 SNORD65B-201ENST00000459126 73 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 AL163540.1-201ENST00000485382 386 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 Y_RNA.711-201ENST00000516993 102 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 AC027419.1-201ENST00000522976 328 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 GNAI2P1-201ENST00000541815 315 ntBASIC1.96□□□□□ -2.1
LRRC53A6NM62 RPS29P30-201ENST00000600975 111 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms