Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 U2.2-201ENST00000616535 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 U2.3-201ENST00000617785 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 U2.19-201ENST00000618602 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 RNU2-1-201ENST00000618664 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 U2.6-201ENST00000619225 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 U2.5-201ENST00000619465 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 U2.10-201ENST00000620268 191 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
ZNF48Q96MX3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 SNORA46-201ENST00000384762 135 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 MIR186-201ENST00000384988 86 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 RNA5SP475-201ENST00000410568 110 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AL139132.1-201ENST00000431587 344 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 SEPT7P4-201ENST00000437076 306 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AL161651.1-201ENST00000440882 223 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 RNU6-826P-201ENST00000516827 104 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 RNU2-12P-201ENST00000517216 168 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AC009127.3-201ENST00000570531 403 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 MIR6733-201ENST00000635723 61 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
ZNF48Q96MX3 AC000403.1-201ENST00000613696 3585 ntBASIC2.48□□□□□ -2.01
ZNF48Q96MX3 MAPK10-266ENST00000641066 6555 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AL035425.3-201ENST00000564206 4996 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 MIR22-201ENST00000362190 85 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 RNU6-454P-201ENST00000364292 107 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 RNU6-763P-201ENST00000390865 106 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 CBX3P9-201ENST00000402326 552 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 MIR320B2-201ENST00000408479 138 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 UQCRHP3-201ENST00000451503 251 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 RNU6-436P-201ENST00000516171 114 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 RNU6-62P-201ENST00000516526 102 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC100767.1-201ENST00000528178 123 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 MIR4672-201ENST00000583126 81 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AL356280.1-201ENST00000603614 379 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 SNRPGP20-201ENST00000604477 205 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AL034555.1-201ENST00000604816 211 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF48Q96MX3 AC091895.1-201ENST00000624494 256 ntBASIC2.47□□□□□ -2.01
ZNF48Q96MX3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.01
ZNF48Q96MX3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.01
ZNF48Q96MX3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 U3.40-201ENST00000408706 208 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 RNA5SP201-201ENST00000410316 124 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 RNU6-735P-201ENST00000410612 107 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC022018.1-201ENST00000430685 241 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AL135790.2-201ENST00000437701 267 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC104389.3-201ENST00000445629 235 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 RNU6-313P-201ENST00000516317 112 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 RNU6-426P-201ENST00000516464 97 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 SNORD116-25-201ENST00000516517 92 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 MIR3923-201ENST00000579521 83 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC006380.1-201ENST00000603598 186 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC006023.1-201ENST00000603944 259 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
ZNF48Q96MX3 AC004944.1-201ENST00000517807 3059 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ZNF48Q96MX3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 RNU6-818P-201ENST00000364837 108 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 RNU6-275P-201ENST00000364910 107 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 RNU1-138P-201ENST00000384093 164 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 RNU6-417P-201ENST00000384712 107 ntBASIC2.45□□□□□ -2.02
ZNF48Q96MX3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 816.9 ms