Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC026470.2-201ENST00000561492 181 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 SNORA77B-201ENST00000578179 125 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 MIR4753-201ENST00000585119 83 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC018638.8-201ENST00000588755 281 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 SNRPGP20-201ENST00000604477 205 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC126177.8-201ENST00000618339 1015 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC137590.2-201ENST00000619709 240 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 MIR7111-201ENST00000619751 72 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 MIR8063-201ENST00000621930 81 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AL133216.2-202ENST00000634512 349 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC068137.4-201ENST00000638485 296 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TNFRSF9Q07011 ICE2P2-201ENST00000483823 2787 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 MTND4P5-201ENST00000435821 1374 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.48-201ENST00000362710 103 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU1-22P-201ENST00000363334 158 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU4-9P-201ENST00000364951 139 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 SNORD114-22-201ENST00000365423 72 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU6-975P-201ENST00000384296 105 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AL117342.1-201ENST00000404861 406 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RPL21P111-201ENST00000418453 477 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RPL30P16-201ENST00000419341 429 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 MTATP6P13-201ENST00000438531 667 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC027119.1-201ENST00000440877 241 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 DAP3P1-201ENST00000441522 278 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.89□□□□□ -2.27
TNFRSF9Q07011 snoU13.30-201ENST00000458951 104 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU6-329P-201ENST00000459618 107 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 HMGN2P9-201ENST00000476875 229 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AL133373.1-201ENST00000497098 94 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC011406.1-201ENST00000512440 370 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU6-948P-201ENST00000516374 107 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.682-201ENST00000516457 100 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU6-856P-201ENST00000516959 98 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 RNU6-58P-201ENST00000517143 103 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AF235103.2-201ENST00000525753 346 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 MIR4273-201ENST00000582824 84 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC084782.3-201ENST00000612282 578 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC093913.1-201ENST00000614178 329 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 MIR6128-201ENST00000615528 109 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 AC009248.2-201ENST00000619826 254 ntBASIC0.89□□□□□ -2.27
TNFRSF9Q07011 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNA5SP327-201ENST00000362494 101 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNU1-96P-201ENST00000364163 162 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNU6-1013P-201ENST00000384180 107 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNU6-842P-201ENST00000384269 107 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.473-201ENST00000384333 102 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 MIR513A1-201ENST00000385138 129 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNU6-192P-201ENST00000391253 100 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNA5SP504-201ENST00000410676 117 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 FCF1P9-201ENST00000412546 282 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 EIF1P1-201ENST00000421436 341 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AC245047.4-201ENST00000433189 144 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 MTND1P17-201ENST00000448961 204 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNU7-57P-201ENST00000459540 60 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 SNORA25.14-201ENST00000516481 132 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNA5SP54-201ENST00000516951 92 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 RNU1-117P-201ENST00000517041 158 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AC027288.2-201ENST00000553028 243 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 UBL5P4-201ENST00000562584 236 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 MIR4452-201ENST00000583004 71 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AP003465.2-201ENST00000602571 373 ntBASIC0.88□□□□□ -2.27
TNFRSF9Q07011 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TNFRSF9Q07011 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TNFRSF9Q07011 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 SNORD115-8-201ENST00000363856 82 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 SNORD115-32-201ENST00000364079 82 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 SNORD87-201ENST00000364849 89 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 SNORD115-38-201ENST00000365037 82 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.319-201ENST00000365138 92 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.355-201ENST00000365462 98 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.405-201ENST00000383979 100 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.451-201ENST00000384200 100 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 RNU6-17P-201ENST00000384245 107 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 RNU6-18P-201ENST00000384527 107 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.524-201ENST00000384564 100 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.561-201ENST00000384694 100 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 MIR586-201ENST00000385035 97 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 MIR153-2-201ENST00000385225 87 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 MIR320B2-201ENST00000408479 138 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 RNU6-57P-201ENST00000411348 103 ntBASIC0.87□□□□□ -2.27
TNFRSF9Q07011 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 272.2 ms