Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
TPM4P67936 U2.17-201ENST00000611454 95 ntBASIC0□□□□□ -2.41
TPM4P67936 AC006435.5-201ENST00000624486 112 ntBASIC0□□□□□ -2.41
TPM4P67936 SNORD113-6-201ENST00000363345 75 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 RNU6-833P-201ENST00000363486 107 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 RNY4P34-201ENST00000364779 95 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 MIR891A-201ENST00000401237 79 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 AL008987.1-201ENST00000415528 237 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 SNRPGP12-201ENST00000449481 213 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 HMGN2P26-201ENST00000463169 339 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 AC005178.1-201ENST00000508392 440 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.01□□□□□ -2.41
TPM4P67936 RNU6-341P-201ENST00000516973 96 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 AK6P2-201ENST00000549020 471 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 AL078603.1-201ENST00000603824 313 ntBASIC-0.01□□□□□ -2.41
TPM4P67936 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
TPM4P67936 SNORA1B-201ENST00000362535 133 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 RNA5SP62-201ENST00000363457 110 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 SNORD87-201ENST00000364849 89 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 MIR573-201ENST00000384964 99 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 MIR487A-201ENST00000385009 80 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 U8.21-201ENST00000459536 136 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 AP002004.2-201ENST00000531656 154 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 AC023157.2-201ENST00000540596 141 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.02□□□□□ -2.41
TPM4P67936 MIR4300-201ENST00000581016 96 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 MIR3682-201ENST00000581338 84 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 AL008636.1-201ENST00000625038 1018 ntBASIC-0.02□□□□□ -2.41
TPM4P67936 SNORD113.3-201ENST00000364630 78 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 MIR450B-201ENST00000401182 78 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 RNU2-29P-201ENST00000410423 189 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 RNA5SP511-201ENST00000410487 115 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.03□□□□□ -2.41
TPM4P67936 SNORD65B-201ENST00000459126 73 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 RNA5SP54-201ENST00000516951 92 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 AC091178.2-201ENST00000584401 117 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 Z84480.1-201ENST00000605131 311 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 AC015726.2-201ENST00000620112 122 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 OR5AK4P-201ENST00000635912 903 ntBASIC-0.03□□□□□ -2.41
TPM4P67936 MIR1-1-201ENST00000362147 71 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 MTCO3P19-201ENST00000415864 321 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.04□□□□□ -2.42
TPM4P67936 MTCO3P10-201ENST00000455912 772 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AC091021.1-201ENST00000468051 388 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AC097462.1-201ENST00000514125 324 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AC074133.1-201ENST00000515696 183 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 RNU7-41P-201ENST00000515917 61 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 RNU11-2P-201ENST00000516898 142 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 MTND1P35-201ENST00000526739 508 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AC104383.1-201ENST00000530297 370 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AL137161.1-201ENST00000532231 390 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.04□□□□□ -2.42
TPM4P67936 AC007684.1-201ENST00000609671 477 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.04□□□□□ -2.42
TPM4P67936 uc_338.34-201ENST00000617467 174 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 AC092634.7-201ENST00000621022 103 ntBASIC-0.04□□□□□ -2.42
TPM4P67936 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 RNU6-195P-201ENST00000411352 109 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 SSR1P2-201ENST00000415208 787 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 ZNF114P1-201ENST00000453500 292 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.05□□□□□ -2.42
TPM4P67936 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.05□□□□□ -2.42
TPM4P67936 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.05□□□□□ -2.42
TPM4P67936 AC104695.3-201ENST00000604052 296 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 AP000240.1-201ENST00000609910 452 ntBASIC-0.05□□□□□ -2.42
TPM4P67936 AC073544.1-201ENST00000600110 1595 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 MIR18A-201ENST00000362310 71 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.06□□□□□ -2.42
TPM4P67936 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.06□□□□□ -2.42
TPM4P67936 AC009961.2-201ENST00000435771 251 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.06□□□□□ -2.42
TPM4P67936 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.06□□□□□ -2.42
TPM4P67936 RNU7-172P-201ENST00000517125 64 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 RPL21P9-201ENST00000556149 474 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 AC010620.1-201ENST00000601088 1102 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 MIR98-201ENST00000606724 119 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 MIR4315-1-201ENST00000636800 73 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 MIR4315-2-201ENST00000640925 73 ntBASIC-0.06□□□□□ -2.42
TPM4P67936 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.07□□□□□ -2.42
TPM4P67936 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.07□□□□□ -2.42
TPM4P67936 RNU6-42P-201ENST00000384165 107 ntBASIC-0.07□□□□□ -2.42
TPM4P67936 ZNF885P-201ENST00000420174 1098 ntBASIC-0.07□□□□□ -2.42
TPM4P67936 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.07□□□□□ -2.42
TPM4P67936 HSFY5P-201ENST00000453726 309 ntBASIC-0.07□□□□□ -2.42
TPM4P67936 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.07□□□□□ -2.42
TPM4P67936 EIF1P4-201ENST00000572664 335 ntBASIC-0.07□□□□□ -2.42
TPM4P67936 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.07□□□□□ -2.42
TPM4P67936 SNORD115-8-201ENST00000363856 82 ntBASIC-0.08□□□□□ -2.42
TPM4P67936 RNA5SP48-201ENST00000363969 126 ntBASIC-0.08□□□□□ -2.42
TPM4P67936 SNORD115-38-201ENST00000365037 82 ntBASIC-0.08□□□□□ -2.42
TPM4P67936 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
TPM4P67936 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.08□□□□□ -2.42
TPM4P67936 RNU6-606P-201ENST00000384721 111 ntBASIC-0.08□□□□□ -2.42
TPM4P67936 MIR520C-201ENST00000385005 87 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 260.6 ms