Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 Y_RNA.140-201ENST00000363474 103 ntBASIC2.3□□□□□ -2.04
MMP3P08254 RNU6-961P-201ENST00000363893 105 ntBASIC2.3□□□□□ -2.04
MMP3P08254 Y_RNA.238-201ENST00000364441 102 ntBASIC2.3□□□□□ -2.04
MMP3P08254 RNU6-234P-201ENST00000365229 104 ntBASIC2.3□□□□□ -2.04
MMP3P08254 Y_RNA.526-201ENST00000384572 110 ntBASIC2.3□□□□□ -2.04
MMP3P08254 MIR95-201ENST00000385072 81 ntBASIC2.3□□□□□ -2.04
MMP3P08254 MIR524-201ENST00000385242 87 ntBASIC2.3□□□□□ -2.04
MMP3P08254 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.3□□□□□ -2.04
MMP3P08254 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
MMP3P08254 MIR548F4-201ENST00000408515 105 ntBASIC2.3□□□□□ -2.04
MMP3P08254 ELOCP20-201ENST00000422460 345 ntBASIC2.3□□□□□ -2.04
MMP3P08254 SDAD1P3-201ENST00000427380 333 ntBASIC2.3□□□□□ -2.04
MMP3P08254 CBX3P6-201ENST00000430257 527 ntBASIC2.3□□□□□ -2.04
MMP3P08254 AC018868.1-201ENST00000491307 315 ntBASIC2.3□□□□□ -2.04
MMP3P08254 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.3□□□□□ -2.04
MMP3P08254 AC067942.3-201ENST00000512025 362 ntBASIC2.3□□□□□ -2.04
MMP3P08254 RNU6-408P-201ENST00000515910 100 ntBASIC2.3□□□□□ -2.04
MMP3P08254 RNU6-897P-201ENST00000517135 105 ntBASIC2.3□□□□□ -2.04
MMP3P08254 AL355297.3-201ENST00000604082 446 ntBASIC2.3□□□□□ -2.04
MMP3P08254 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.3□□□□□ -2.04
MMP3P08254 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MMP3P08254 Y_RNA.143-201ENST00000363520 106 ntBASIC2.29□□□□□ -2.04
MMP3P08254 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
MMP3P08254 Y_RNA.551-201ENST00000384661 102 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RNU6-1072P-201ENST00000384703 107 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RNU6-443P-201ENST00000384780 107 ntBASIC2.29□□□□□ -2.04
MMP3P08254 SNORA26.9-201ENST00000391322 122 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
MMP3P08254 Y_RNA.595-201ENST00000410403 105 ntBASIC2.29□□□□□ -2.04
MMP3P08254 AL358176.2-201ENST00000425769 204 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RPL26P26-201ENST00000480251 434 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RPS23P5-201ENST00000495419 428 ntBASIC2.29□□□□□ -2.04
MMP3P08254 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
MMP3P08254 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
MMP3P08254 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
MMP3P08254 RNY3P15-201ENST00000516297 97 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RNU6-107P-201ENST00000516643 102 ntBASIC2.29□□□□□ -2.04
MMP3P08254 RNU6-667P-201ENST00000517186 102 ntBASIC2.29□□□□□ -2.04
MMP3P08254 AC022616.8-201ENST00000533569 253 ntBASIC2.29□□□□□ -2.04
MMP3P08254 AC018630.3-201ENST00000542637 96 ntBASIC2.29□□□□□ -2.04
MMP3P08254 AK6P2-201ENST00000549020 471 ntBASIC2.29□□□□□ -2.04
MMP3P08254 MIR4658-201ENST00000584344 65 ntBASIC2.29□□□□□ -2.04
MMP3P08254 AL121655.1-201ENST00000605811 308 ntBASIC2.29□□□□□ -2.04
MMP3P08254 MIR6845-201ENST00000613182 61 ntBASIC2.29□□□□□ -2.04
MMP3P08254 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.28□□□□□ -2.04
MMP3P08254 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
MMP3P08254 RNU1-62P-201ENST00000362599 164 ntBASIC2.28□□□□□ -2.04
MMP3P08254 RNU6-1305P-201ENST00000364353 104 ntBASIC2.28□□□□□ -2.04
MMP3P08254 RNA5SP240-201ENST00000365355 128 ntBASIC2.28□□□□□ -2.04
MMP3P08254 Y_RNA.380-201ENST00000365663 111 ntBASIC2.28□□□□□ -2.04
MMP3P08254 RNU6-574P-201ENST00000384265 107 ntBASIC2.28□□□□□ -2.04
MMP3P08254 RNU2-48P-201ENST00000410694 191 ntBASIC2.28□□□□□ -2.04
MMP3P08254 FCF1P4-201ENST00000448326 183 ntBASIC2.28□□□□□ -2.04
MMP3P08254 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.28□□□□□ -2.04
MMP3P08254 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
MMP3P08254 AL117187.1-201ENST00000555482 181 ntBASIC2.28□□□□□ -2.04
MMP3P08254 AC055872.1-201ENST00000570978 278 ntBASIC2.28□□□□□ -2.04
MMP3P08254 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.28□□□□□ -2.04
MMP3P08254 SNORD11B-201ENST00000607707 90 ntBASIC2.28□□□□□ -2.04
MMP3P08254 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.28□□□□□ -2.04
MMP3P08254 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
MMP3P08254 MIR203B-201ENST00000636080 86 ntBASIC2.28□□□□□ -2.04
MMP3P08254 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.28□□□□□ -2.04
MMP3P08254 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.28□□□□□ -2.04
MMP3P08254 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
MMP3P08254 Y_RNA.64-201ENST00000362845 102 ntBASIC2.27□□□□□ -2.05
MMP3P08254 Y_RNA.133-201ENST00000363428 110 ntBASIC2.27□□□□□ -2.05
MMP3P08254 Y_RNA.214-201ENST00000364201 112 ntBASIC2.27□□□□□ -2.05
MMP3P08254 Y_RNA.439-201ENST00000384119 94 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNU6-937P-201ENST00000384325 106 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNU6-1026P-201ENST00000384465 108 ntBASIC2.27□□□□□ -2.05
MMP3P08254 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNU6-121P-201ENST00000410525 99 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNA5SP247-201ENST00000411181 105 ntBASIC2.27□□□□□ -2.05
MMP3P08254 ELOCP21-201ENST00000412558 336 ntBASIC2.27□□□□□ -2.05
MMP3P08254 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
MMP3P08254 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.27□□□□□ -2.05
MMP3P08254 MTND3P2-201ENST00000438452 342 ntBASIC2.27□□□□□ -2.05
MMP3P08254 DYNLT3P2-201ENST00000442517 295 ntBASIC2.27□□□□□ -2.05
MMP3P08254 AC007395.1-201ENST00000451333 677 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNU6-625P-201ENST00000459412 107 ntBASIC2.27□□□□□ -2.05
MMP3P08254 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
MMP3P08254 SNORA4.4-201ENST00000515921 135 ntBASIC2.27□□□□□ -2.05
MMP3P08254 SNORA40.15-201ENST00000516884 107 ntBASIC2.27□□□□□ -2.05
MMP3P08254 RNA5SP490-201ENST00000517141 136 ntBASIC2.27□□□□□ -2.05
MMP3P08254 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.27□□□□□ -2.05
MMP3P08254 AC018448.1-201ENST00000552843 316 ntBASIC2.27□□□□□ -2.05
MMP3P08254 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.27□□□□□ -2.05
MMP3P08254 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP3P08254 AC136932.1-201ENST00000574771 208 ntBASIC2.27□□□□□ -2.05
MMP3P08254 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.27□□□□□ -2.05
MMP3P08254 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MMP3P08254 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
MMP3P08254 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
MMP3P08254 Y_RNA.222-201ENST00000364264 102 ntBASIC2.26□□□□□ -2.05
MMP3P08254 SNORA25B-201ENST00000365507 128 ntBASIC2.26□□□□□ -2.05
MMP3P08254 RNU1-52P-201ENST00000384190 164 ntBASIC2.26□□□□□ -2.05
MMP3P08254 SNORA67.2-201ENST00000384300 149 ntBASIC2.26□□□□□ -2.05
MMP3P08254 RPL21P1-201ENST00000399532 476 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms