Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MIR30A-201ENST00000385092 71 ntBASIC2.02□□□□□ -2.09
CD4P01730 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CD4P01730 SNORA75.4-201ENST00000391278 119 ntBASIC2.02□□□□□ -2.09
CD4P01730 RNA5SP504-201ENST00000410676 117 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.02□□□□□ -2.09
CD4P01730 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.02□□□□□ -2.09
CD4P01730 RPL36AP21-201ENST00000490372 323 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC025465.3-201ENST00000510570 311 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC008834.1-201ENST00000511612 175 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.02□□□□□ -2.09
CD4P01730 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
CD4P01730 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.02□□□□□ -2.09
CD4P01730 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.02□□□□□ -2.09
CD4P01730 MIR4303-201ENST00000581299 66 ntBASIC2.02□□□□□ -2.09
CD4P01730 MIR5690-201ENST00000583739 73 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC103810.8-201ENST00000607347 118 ntBASIC2.02□□□□□ -2.09
CD4P01730 AC006001.4-201ENST00000622243 395 ntBASIC2.02□□□□□ -2.09
CD4P01730 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
CD4P01730 MIR337-201ENST00000362281 93 ntBASIC2.01□□□□□ -2.09
CD4P01730 RNY1P10-201ENST00000363268 113 ntBASIC2.01□□□□□ -2.09
CD4P01730 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.01□□□□□ -2.09
CD4P01730 RNU6-281P-201ENST00000384212 103 ntBASIC2.01□□□□□ -2.09
CD4P01730 RNU2-7P-201ENST00000410794 178 ntBASIC2.01□□□□□ -2.09
CD4P01730 RPL23AP50-201ENST00000434149 455 ntBASIC2.01□□□□□ -2.09
CD4P01730 RPL7P42-201ENST00000481005 679 ntBASIC2.01□□□□□ -2.09
CD4P01730 RPL17P19-201ENST00000489069 552 ntBASIC2.01□□□□□ -2.09
CD4P01730 HMGN1P12-201ENST00000499125 195 ntBASIC2.01□□□□□ -2.09
CD4P01730 AC025647.1-201ENST00000517879 253 ntBASIC2.01□□□□□ -2.09
CD4P01730 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CD4P01730 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.01□□□□□ -2.09
CD4P01730 SUB1P3-201ENST00000564581 315 ntBASIC2.01□□□□□ -2.09
CD4P01730 AC092794.2-201ENST00000620933 563 ntBASIC2.01□□□□□ -2.09
CD4P01730 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CD4P01730 RNU6-296P-201ENST00000384608 107 ntBASIC2□□□□□ -2.09
CD4P01730 MIR1185-2-201ENST00000408687 86 ntBASIC2□□□□□ -2.09
CD4P01730 TOMM22P2-201ENST00000430735 237 ntBASIC2□□□□□ -2.09
CD4P01730 HMGN2P34-201ENST00000437647 269 ntBASIC2□□□□□ -2.09
CD4P01730 AC027575.1-201ENST00000481064 460 ntBASIC2□□□□□ -2.09
CD4P01730 TRMT112P2-201ENST00000512910 132 ntBASIC2□□□□□ -2.09
CD4P01730 MIR2355-201ENST00000517199 87 ntBASIC2□□□□□ -2.09
CD4P01730 AC091144.1-201ENST00000519573 138 ntBASIC2□□□□□ -2.09
CD4P01730 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2□□□□□ -2.09
CD4P01730 MIR3684-201ENST00000579779 74 ntBASIC2□□□□□ -2.09
CD4P01730 AL355073.2-201ENST00000612106 557 ntBASIC2□□□□□ -2.09
CD4P01730 AC133104.2-201ENST00000615272 193 ntBASIC2□□□□□ -2.09
CD4P01730 AC126177.8-201ENST00000618339 1015 ntBASIC2□□□□□ -2.09
CD4P01730 MTND5P16-201ENST00000460269 1703 ntBASIC2□□□□□ -2.09
CD4P01730 MTND5P35-201ENST00000557537 1720 ntBASIC2□□□□□ -2.09
CD4P01730 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CD4P01730 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
CD4P01730 Y_RNA.415-201ENST00000384012 112 ntBASIC1.99□□□□□ -2.09
CD4P01730 MIR548B-201ENST00000385247 97 ntBASIC1.99□□□□□ -2.09
CD4P01730 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
CD4P01730 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.99□□□□□ -2.09
CD4P01730 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
CD4P01730 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.99□□□□□ -2.09
CD4P01730 AC084364.2-201ENST00000546924 395 ntBASIC1.99□□□□□ -2.09
CD4P01730 AC093023.1-201ENST00000547375 507 ntBASIC1.99□□□□□ -2.09
CD4P01730 AC004584.2-201ENST00000570407 410 ntBASIC1.99□□□□□ -2.09
CD4P01730 MIR8074-201ENST00000615081 81 ntBASIC1.99□□□□□ -2.09
CD4P01730 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.99□□□□□ -2.09
CD4P01730 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.99□□□□□ -2.09
CD4P01730 AL669831.3-213ENST00000636676 183 ntBASIC1.99□□□□□ -2.09
CD4P01730 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CD4P01730 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD4P01730 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CD4P01730 RNU6-727P-201ENST00000363592 107 ntBASIC1.98□□□□□ -2.09
CD4P01730 SNORA63D-201ENST00000364359 132 ntBASIC1.98□□□□□ -2.09
CD4P01730 Y_RNA.473-201ENST00000384333 102 ntBASIC1.98□□□□□ -2.09
CD4P01730 MIR499A-201ENST00000384903 122 ntBASIC1.98□□□□□ -2.09
CD4P01730 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CD4P01730 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
CD4P01730 EIF1P2-201ENST00000428233 350 ntBASIC1.98□□□□□ -2.09
CD4P01730 AC245047.4-201ENST00000433189 144 ntBASIC1.98□□□□□ -2.09
CD4P01730 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
CD4P01730 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.98□□□□□ -2.09
CD4P01730 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
CD4P01730 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.98□□□□□ -2.09
CD4P01730 RNU6-264P-201ENST00000517134 104 ntBASIC1.98□□□□□ -2.09
CD4P01730 AC022432.1-201ENST00000595739 310 ntBASIC1.98□□□□□ -2.09
CD4P01730 AC113139.1-201ENST00000605049 239 ntBASIC1.98□□□□□ -2.09
CD4P01730 SNORA72.1-201ENST00000363485 129 ntBASIC1.97□□□□□ -2.09
CD4P01730 SNORD87-201ENST00000364849 89 ntBASIC1.97□□□□□ -2.09
CD4P01730 Y_RNA.404-201ENST00000383978 102 ntBASIC1.97□□□□□ -2.09
CD4P01730 AL445305.1-201ENST00000432577 575 ntBASIC1.97□□□□□ -2.09
CD4P01730 AL353997.1-201ENST00000432936 108 ntBASIC1.97□□□□□ -2.09
CD4P01730 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.97□□□□□ -2.09
CD4P01730 SCARNA16.2-201ENST00000516520 172 ntBASIC1.97□□□□□ -2.09
CD4P01730 APOOP3-201ENST00000536787 586 ntBASIC1.97□□□□□ -2.09
CD4P01730 DNAJC19P9-201ENST00000555084 351 ntBASIC1.97□□□□□ -2.09
CD4P01730 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
CD4P01730 UBE2V2P2-201ENST00000587677 504 ntBASIC1.97□□□□□ -2.09
CD4P01730 AC006435.5-201ENST00000624486 112 ntBASIC1.97□□□□□ -2.09
CD4P01730 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CD4P01730 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.97□□□□□ -2.09
CD4P01730 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD4P01730 RNU6-222P-201ENST00000362438 107 ntBASIC1.96□□□□□ -2.1
CD4P01730 Y_RNA.508-201ENST00000384502 114 ntBASIC1.96□□□□□ -2.1
CD4P01730 RNU6-950P-201ENST00000384651 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms