Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RNU6-546P-201ENST00000383991 107 ntBASIC1.73□□□□□ -2.13
PHF1O43189 RNU6-1145P-201ENST00000384246 107 ntBASIC1.73□□□□□ -2.13
PHF1O43189 RNU6-611P-201ENST00000384276 104 ntBASIC1.73□□□□□ -2.13
PHF1O43189 MIR561-201ENST00000385216 97 ntBASIC1.73□□□□□ -2.13
PHF1O43189 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PHF1O43189 MIR1294-201ENST00000408503 142 ntBASIC1.73□□□□□ -2.13
PHF1O43189 RNA5SP504-201ENST00000410676 117 ntBASIC1.73□□□□□ -2.13
PHF1O43189 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.73□□□□□ -2.13
PHF1O43189 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.73□□□□□ -2.13
PHF1O43189 MTCO3P8-201ENST00000453691 755 ntBASIC1.73□□□□□ -2.13
PHF1O43189 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
PHF1O43189 AL109918.3-201ENST00000603072 338 ntBASIC1.73□□□□□ -2.13
PHF1O43189 AL355297.2-201ENST00000604792 129 ntBASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.812-201ENST00000610788 101 ntBASIC1.73□□□□□ -2.13
PHF1O43189 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.73□□□□□ -2.13
PHF1O43189 AL627230.6-201ENST00000611129 280 ntBASIC1.73□□□□□ -2.13
PHF1O43189 AC006157.1-201ENST00000611750 366 ntBASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.783-201ENST00000613546 102 ntBASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.784-201ENST00000613803 101 ntBASIC1.73□□□□□ -2.13
PHF1O43189 AC083806.3-201ENST00000614016 455 ntBASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.787-201ENST00000616522 101 ntBASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.780-201ENST00000617336 101 ntBASIC1.73□□□□□ -2.13
PHF1O43189 AC007742.2-201ENST00000618226 398 ntBASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.801-201ENST00000619005 101 ntBASIC1.73□□□□□ -2.13
PHF1O43189 MIR1248-201ENST00000629190 106 ntBASIC1.73□□□□□ -2.13
PHF1O43189 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
PHF1O43189 CENPCP1-201ENST00000533085 2578 ntBASIC1.73□□□□□ -2.13
PHF1O43189 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PHF1O43189 AC005592.1-201ENST00000566527 1640 ntBASIC1.73□□□□□ -2.13
PHF1O43189 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
PHF1O43189 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PHF1O43189 Y_RNA.158-201ENST00000363651 101 ntBASIC1.72□□□□□ -2.13
PHF1O43189 SNORA25B-201ENST00000365507 128 ntBASIC1.72□□□□□ -2.13
PHF1O43189 SNORA18.2-201ENST00000383865 132 ntBASIC1.72□□□□□ -2.13
PHF1O43189 RNU6-541P-201ENST00000384709 110 ntBASIC1.72□□□□□ -2.13
PHF1O43189 MIR549A-201ENST00000385268 96 ntBASIC1.72□□□□□ -2.13
PHF1O43189 SNORA17.3-201ENST00000391159 129 ntBASIC1.72□□□□□ -2.13
PHF1O43189 MRPL42P3-201ENST00000401492 326 ntBASIC1.72□□□□□ -2.13
PHF1O43189 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
PHF1O43189 RNU2-32P-201ENST00000411193 191 ntBASIC1.72□□□□□ -2.13
PHF1O43189 EDDM3CP-201ENST00000415977 425 ntBASIC1.72□□□□□ -2.13
PHF1O43189 AL445646.1-201ENST00000431784 216 ntBASIC1.72□□□□□ -2.13
PHF1O43189 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.72□□□□□ -2.13
PHF1O43189 AC004386.2-201ENST00000441858 148 ntBASIC1.72□□□□□ -2.13
PHF1O43189 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
PHF1O43189 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.72□□□□□ -2.13
PHF1O43189 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.72□□□□□ -2.13
PHF1O43189 AC091179.3-201ENST00000474761 144 ntBASIC1.72□□□□□ -2.13
PHF1O43189 AC005840.1-201ENST00000498412 377 ntBASIC1.72□□□□□ -2.13
PHF1O43189 ATP5EP1-201ENST00000510257 156 ntBASIC1.72□□□□□ -2.13
PHF1O43189 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
PHF1O43189 RN7SKP49-201ENST00000516675 260 ntBASIC1.72□□□□□ -2.13
PHF1O43189 RNU6-1098P-201ENST00000516772 96 ntBASIC1.72□□□□□ -2.13
PHF1O43189 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
PHF1O43189 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.72□□□□□ -2.13
PHF1O43189 AL353621.2-201ENST00000605340 133 ntBASIC1.72□□□□□ -2.13
PHF1O43189 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.72□□□□□ -2.13
PHF1O43189 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PHF1O43189 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
PHF1O43189 Y_RNA.27-201ENST00000362540 103 ntBASIC1.71□□□□□ -2.14
PHF1O43189 SNORA63-201ENST00000363450 132 ntBASIC1.71□□□□□ -2.14
PHF1O43189 SNORA40.18-201ENST00000391200 128 ntBASIC1.71□□□□□ -2.14
PHF1O43189 MIR320B2-201ENST00000408479 138 ntBASIC1.71□□□□□ -2.14
PHF1O43189 RNU6-1001P-201ENST00000411265 100 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC114482.1-201ENST00000418010 247 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC027124.2-201ENST00000428249 105 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC096644.2-201ENST00000429278 159 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC016925.1-201ENST00000458303 298 ntBASIC1.71□□□□□ -2.14
PHF1O43189 RNU7-87P-201ENST00000459343 62 ntBASIC1.71□□□□□ -2.14
PHF1O43189 SNORA25.14-201ENST00000516481 132 ntBASIC1.71□□□□□ -2.14
PHF1O43189 RNU6-1012P-201ENST00000516606 109 ntBASIC1.71□□□□□ -2.14
PHF1O43189 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC091144.1-201ENST00000519573 138 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC034114.1-201ENST00000520293 285 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC006600.1-201ENST00000572529 153 ntBASIC1.71□□□□□ -2.14
PHF1O43189 MIR3126-201ENST00000577443 74 ntBASIC1.71□□□□□ -2.14
PHF1O43189 MIR4287-201ENST00000579398 78 ntBASIC1.71□□□□□ -2.14
PHF1O43189 MIR4680-201ENST00000580906 66 ntBASIC1.71□□□□□ -2.14
PHF1O43189 MIR3935-201ENST00000583472 104 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC016925.2-201ENST00000605108 242 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AL359821.1-201ENST00000605519 182 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC005296.1-201ENST00000616145 209 ntBASIC1.71□□□□□ -2.14
PHF1O43189 AC091932.3-201ENST00000624223 323 ntBASIC1.71□□□□□ -2.14
PHF1O43189 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.71□□□□□ -2.14
PHF1O43189 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.71□□□□□ -2.14
PHF1O43189 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
PHF1O43189 RNA5SP361-201ENST00000362686 118 ntBASIC1.7□□□□□ -2.14
PHF1O43189 SNORD31B-201ENST00000364977 69 ntBASIC1.7□□□□□ -2.14
PHF1O43189 Y_RNA.332-201ENST00000365271 113 ntBASIC1.7□□□□□ -2.14
PHF1O43189 RNU6-793P-201ENST00000384233 104 ntBASIC1.7□□□□□ -2.14
PHF1O43189 Y_RNA.485-201ENST00000384395 102 ntBASIC1.7□□□□□ -2.14
PHF1O43189 MIR7-2-201ENST00000384970 110 ntBASIC1.7□□□□□ -2.14
PHF1O43189 MIR586-201ENST00000385035 97 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AL512604.1-201ENST00000404812 257 ntBASIC1.7□□□□□ -2.14
PHF1O43189 Y_RNA.605-201ENST00000410577 105 ntBASIC1.7□□□□□ -2.14
PHF1O43189 AL139156.1-201ENST00000412785 841 ntBASIC1.7□□□□□ -2.14
PHF1O43189 MTCO3P19-201ENST00000415864 321 ntBASIC1.7□□□□□ -2.14
PHF1O43189 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
PHF1O43189 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.7□□□□□ -2.14
PHF1O43189 SDAD1P3-201ENST00000427380 333 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms