Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 AL049781.1-201ENST00000623195 3585 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 AP001486.2-201ENST00000561652 5113 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 RNA5SP295-201ENST00000362655 121 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 RN7SKP156-201ENST00000410308 342 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 RNU7-172P-201ENST00000517125 64 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 AC006254.2-201ENST00000603259 279 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 AC008555.8-201ENST00000623602 2168 ntBASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB11Q9Y5F2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB11Q9Y5F2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PCDHB11Q9Y5F2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 MIR208A-201ENST00000362287 71 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 RNA5SP399-201ENST00000364003 117 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 HMGN2P18-201ENST00000450680 270 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 Y_RNA.649-201ENST00000459077 103 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 MRPS36P2-201ENST00000512569 299 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 RNU1-104P-201ENST00000517280 175 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 RNA5SP179-201ENST00000517284 121 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 AC007751.1-201ENST00000529260 376 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 AC091167.4-201ENST00000605079 184 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 AL022345.2-201ENST00000606307 135 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 AC025166.1-201ENST00000612411 163 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 AC012314.7-201ENST00000619693 93 ntBASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB11Q9Y5F2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 Y_RNA.66-201ENST00000362862 102 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 Y_RNA.486-201ENST00000384398 107 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 MIR30B-201ENST00000384850 88 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 RPS29P21-201ENST00000496272 170 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 Y_RNA.694-201ENST00000516677 117 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 IPO8P1-201ENST00000455509 3109 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 AC091564.4-201ENST00000533934 2194 ntBASIC3.82□□□□□ -1.8
PCDHB11Q9Y5F2 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 U6atac.2-201ENST00000408644 118 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 MTATP6P21-201ENST00000440681 189 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 RNU6-365P-201ENST00000517113 106 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 JPX_2.1-201ENST00000614161 69 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 MIR1248-201ENST00000629190 106 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 AL136360.1-201ENST00000503377 1900 ntBASIC3.81□□□□□ -1.8
PCDHB11Q9Y5F2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 RNA5SP119-201ENST00000362715 117 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 MIR548A1-201ENST00000385041 97 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 PRSS3P4-201ENST00000453323 162 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 AC026726.1-201ENST00000512859 601 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 RNU6-965P-201ENST00000516721 96 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 RNA5SP490-201ENST00000517141 136 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 YPEL5P3-201ENST00000547227 352 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 UCA1.1-201ENST00000620952 75 ntBASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB11Q9Y5F2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 MFSD8-236ENST00000641509 4050 ntBASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 AF228730.3-201ENST00000436691 102 ntBASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 MTCO1P44-201ENST00000441935 243 ntBASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 AC025750.2-201ENST00000442609 450 ntBASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 AC093663.1-201ENST00000497190 394 ntBASIC3.79□□□□□ -1.8
PCDHB11Q9Y5F2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms