Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RPS24P1-201ENST00000438550 371 ntBASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 AC013470.1-201ENST00000453438 462 ntBASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 RNU7-94P-201ENST00000459576 63 ntBASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 AC016632.1-201ENST00000503994 196 ntBASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 RNU2-60P-201ENST00000517290 128 ntBASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 MIR4676-201ENST00000583078 72 ntBASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.02□□□□□ -2.57
GAFA1Q96PS6 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MIR520C-201ENST00000385005 87 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AC010975.2-201ENST00000427781 588 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 SUMO1P2-201ENST00000452524 304 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AC093899.1-201ENST00000457984 376 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AL049829.1-201ENST00000465411 156 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MTCO3P27-201ENST00000514397 196 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 RNU6-583P-201ENST00000516012 92 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AP001372.4-201ENST00000524889 472 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MIR4771-2-201ENST00000577758 74 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MIR3152-201ENST00000579801 74 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 MIR4771-1-201ENST00000582617 74 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 Z99289.3-201ENST00000605586 594 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AC005332.6-201ENST00000613178 446 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AC087588.2-201ENST00000617667 426 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 AC026585.1-201ENST00000619582 524 ntBASIC-1.03□□□□□ -2.57
GAFA1Q96PS6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AC106754.1-201ENST00000562632 1513 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 RNU6-527P-201ENST00000363425 104 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 RNU6-580P-201ENST00000365159 107 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 RNU2-3P-201ENST00000410144 191 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 RNU6-735P-201ENST00000410612 107 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 USP9YP11-201ENST00000427537 717 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 SNORA18.7-201ENST00000516910 131 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 VN1R87P-201ENST00000596706 487 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AC020891.4-201ENST00000605745 93 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AC097478.2-201ENST00000610572 514 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AC010999.1-201ENST00000611856 324 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AC005520.5-201ENST00000613926 164 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 MIR1264-201ENST00000616374 69 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 AC068792.1-201ENST00000621354 417 ntBASIC-1.04□□□□□ -2.58
GAFA1Q96PS6 SNORD114-14-201ENST00000362723 75 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 SNORD114-15-201ENST00000364687 72 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 SNORD51.1-201ENST00000365405 77 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 RNU4-22P-201ENST00000411058 166 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 RNU4-63P-201ENST00000411313 118 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 MLLT10P1-201ENST00000418346 262 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 MTCO1P5-201ENST00000433573 344 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 AC007215.1-201ENST00000464893 276 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 AC023632.1-201ENST00000518463 375 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 AC008608.1-201ENST00000603910 127 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 uc_338.28-201ENST00000612082 187 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 U6.42-201ENST00000618440 107 ntBASIC-1.05□□□□□ -2.58
GAFA1Q96PS6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AL355143.1-201ENST00000407101 841 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 BTF3P11-201ENST00000426582 477 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AC078809.1-201ENST00000427601 140 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 RPS29P27-201ENST00000463711 170 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AC079395.1-201ENST00000510981 262 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 SNORA14.1-201ENST00000516113 141 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 RNU7-99P-201ENST00000516271 62 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 SNORA74.3-201ENST00000517108 154 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AC010525.2-201ENST00000590920 195 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 RNU1-29P-201ENST00000606574 126 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AL139286.2-201ENST00000606838 396 ntBASIC-1.06□□□□□ -2.58
GAFA1Q96PS6 AC005592.1-201ENST00000566527 1640 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 MTND5P32-201ENST00000560711 1802 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 MTND1P4-201ENST00000435196 415 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 SNRPGP7-201ENST00000469016 106 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 MIR2115-201ENST00000516657 100 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 AC025647.1-201ENST00000517879 253 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 CR383656.4-201ENST00000546909 122 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 MIR548AX-201ENST00000580117 73 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 AC174048.1-201ENST00000603389 144 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 AL590491.3-201ENST00000610731 82 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 AL442067.1-201ENST00000613261 223 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 AC104260.1-201ENST00000616660 539 ntBASIC-1.07□□□□□ -2.58
GAFA1Q96PS6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms