Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC022868.1-201ENST00000517767 391 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 SNRPGP20-201ENST00000604477 205 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 AL096861.1-201ENST00000610899 123 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
RFX7Q2KHR2 Pinc.1-201ENST00000616452 154 ntBASIC0.06□□□□□ -2.4
RFX7Q2KHR2 MTND5P17-201ENST00000418405 1603 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 MIR103A2-201ENST00000362154 78 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 RNA5SP264-201ENST00000363115 107 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 RNU6-923P-201ENST00000364753 107 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.549-201ENST00000384657 102 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 MIR320B2-201ENST00000408479 138 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AC016909.1-201ENST00000415916 166 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.05□□□□□ -2.4
RFX7Q2KHR2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.05□□□□□ -2.4
RFX7Q2KHR2 MTCO3P8-201ENST00000453691 755 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AC093850.1-201ENST00000454121 251 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.05□□□□□ -2.4
RFX7Q2KHR2 TPT1P7-201ENST00000458300 517 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.05□□□□□ -2.4
RFX7Q2KHR2 RNU7-99P-201ENST00000516271 62 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AP003168.1-201ENST00000530091 307 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AC004223.2-201ENST00000590309 544 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AC007014.2-201ENST00000615581 479 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 SEPT14P17-201ENST00000617978 177 ntBASIC0.05□□□□□ -2.4
RFX7Q2KHR2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.05□□□□□ -2.4
RFX7Q2KHR2 SNORA20.2-201ENST00000383922 131 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.608-201ENST00000410647 95 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.04□□□□□ -2.4
RFX7Q2KHR2 CALM2P4-201ENST00000430810 426 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 AC004854.1-201ENST00000440356 349 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.04□□□□□ -2.4
RFX7Q2KHR2 AC010493.1-201ENST00000513479 292 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 RSL24D1P11-201ENST00000591045 491 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 AC092354.1-201ENST00000606057 376 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 AC022418.1-201ENST00000624118 445 ntBASIC0.04□□□□□ -2.4
RFX7Q2KHR2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
RFX7Q2KHR2 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU5E-10P-201ENST00000363506 118 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-1097P-201ENST00000363586 107 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.167-201ENST00000363735 109 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-660P-201ENST00000364566 109 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-424P-201ENST00000384367 105 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-434P-201ENST00000384376 107 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-393P-201ENST00000384475 107 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 Y_RNA.518-201ENST00000384552 113 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-636P-201ENST00000384598 107 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 SNORD105-201ENST00000386910 85 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 U8.16-201ENST00000391279 133 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNA5SP494-201ENST00000410653 129 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AL663109.1-201ENST00000411498 844 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 Z95118.1-201ENST00000421372 247 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 MTCYBP10-201ENST00000424905 650 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-221P-201ENST00000459541 99 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AC010469.2-201ENST00000496412 480 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AC069113.1-201ENST00000517763 267 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AC022616.3-201ENST00000523940 148 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.03□□□□□ -2.4
RFX7Q2KHR2 U6.73-201ENST00000619194 103 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 AL031667.3-201ENST00000620124 655 ntBASIC0.03□□□□□ -2.4
RFX7Q2KHR2 RNU6-1266P-201ENST00000362794 105 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 SNORA2A-201ENST00000383885 135 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 RNY1P8-201ENST00000383970 114 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.02□□□□□ -2.41
RFX7Q2KHR2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.02□□□□□ -2.41
RFX7Q2KHR2 EPS15P1-201ENST00000448836 336 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 USP9YP25-201ENST00000457708 443 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 SCARNA24.1-201ENST00000516465 137 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 MTND4LP26-201ENST00000518144 282 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 PCMTD1P2-201ENST00000565017 355 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 MIR4300-201ENST00000581016 96 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 AC025449.1-201ENST00000603896 529 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 AC011155.2-201ENST00000623202 216 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 AL078595.3-201ENST00000623815 1166 ntBASIC0.02□□□□□ -2.41
RFX7Q2KHR2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.02□□□□□ -2.41
RFX7Q2KHR2 Y_RNA.185-201ENST00000363894 100 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 RNA5SP219-201ENST00000390940 113 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 Z99497.1-201ENST00000421282 135 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 MRPS18CP6-201ENST00000423587 223 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.01□□□□□ -2.41
RFX7Q2KHR2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.01□□□□□ -2.41
RFX7Q2KHR2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.01□□□□□ -2.41
RFX7Q2KHR2 Y_RNA.672-201ENST00000516289 104 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 RNU7-28P-201ENST00000516759 62 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 AC002044.1-201ENST00000606707 158 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 RNU6-94P-201ENST00000607728 107 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 FAM157A-202ENST00000615155 405 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 AL138960.2-201ENST00000625145 535 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 MIR6079-201ENST00000635807 62 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 AL390237.1-201ENST00000404226 1415 ntBASIC0.01□□□□□ -2.41
RFX7Q2KHR2 RNU6-157P-201ENST00000383957 107 ntBASIC0□□□□□ -2.41
RFX7Q2KHR2 SNORD111-201ENST00000408139 94 ntBASIC0□□□□□ -2.41
RFX7Q2KHR2 AL022718.1-201ENST00000412004 84 ntBASIC0□□□□□ -2.41
RFX7Q2KHR2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0□□□□□ -2.41
RFX7Q2KHR2 RPL23AP54-201ENST00000495129 419 ntBASIC0□□□□□ -2.41
RFX7Q2KHR2 RNU1-117P-201ENST00000517041 158 ntBASIC0□□□□□ -2.41
RFX7Q2KHR2 RNU7-128P-201ENST00000517247 62 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 297.4 ms