Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
EPHB3P54753 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 Y_RNA.24-201ENST00000362508 103 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 Y_RNA.456-201ENST00000384232 111 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 AC006461.1-201ENST00000412637 326 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 TOMM22P2-201ENST00000430735 237 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.26□□□□□ -1.89
EPHB3P54753 AC092991.1-201ENST00000477176 376 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 RPL23AP70-201ENST00000483361 460 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 RNU6-928P-201ENST00000516876 104 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 RMST_8.1-201ENST00000610287 165 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 PCGEM1.1-201ENST00000613431 131 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 AL137790.1-201ENST00000634283 177 ntBASIC3.26□□□□□ -1.89
EPHB3P54753 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
EPHB3P54753 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
EPHB3P54753 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
EPHB3P54753 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
EPHB3P54753 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
EPHB3P54753 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
EPHB3P54753 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 RNU1-75P-201ENST00000347264 129 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 Y_RNA.310-201ENST00000365063 113 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 RNU6-407P-201ENST00000365280 104 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 RNU6-969P-201ENST00000383900 105 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
EPHB3P54753 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 CYCSP26-201ENST00000534107 320 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 TCL6_2.1-201ENST00000615162 119 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 AC005562.2-201ENST00000618264 111 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
EPHB3P54753 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHB3P54753 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
EPHB3P54753 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
EPHB3P54753 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
EPHB3P54753 SNORA80A-201ENST00000363922 136 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 SNORD87-201ENST00000364849 89 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 SNORA54-201ENST00000384281 123 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 MIR15B-201ENST00000385045 98 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 SNORD37.2-201ENST00000391075 66 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 AL161651.1-201ENST00000440882 223 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 AL121914.1-201ENST00000450188 156 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 snoU13.14-201ENST00000459372 104 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.24□□□□□ -1.89
EPHB3P54753 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.24□□□□□ -1.89
EPHB3P54753 AP000867.2-201ENST00000532468 320 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 AC027176.1-201ENST00000560204 514 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
EPHB3P54753 AC011603.4-201ENST00000611325 277 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 AC012640.5-201ENST00000623897 319 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 SNORA50A-202ENST00000629536 136 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
EPHB3P54753 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
EPHB3P54753 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
EPHB3P54753 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
EPHB3P54753 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
EPHB3P54753 RNU6-1205P-201ENST00000363625 106 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 Y_RNA.341-201ENST00000365341 102 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 RNU6-1228P-201ENST00000391014 107 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 RNU6-855P-201ENST00000410395 104 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
EPHB3P54753 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.23□□□□□ -1.89
EPHB3P54753 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.23□□□□□ -1.89
EPHB3P54753 AC010099.1-201ENST00000455434 375 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 AC245047.8-201ENST00000456455 284 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 RNU7-141P-201ENST00000459304 62 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.23□□□□□ -1.89
EPHB3P54753 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.23□□□□□ -1.89
EPHB3P54753 PDCD5P2-201ENST00000507570 312 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 RN7SKP179-201ENST00000516126 217 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.23□□□□□ -1.89
EPHB3P54753 EIF4A1P12-201ENST00000551910 141 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 AC105137.2-201ENST00000569073 466 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 U7.2-201ENST00000607576 63 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 RNU6-91P-201ENST00000607774 107 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 MIR3199-2-201ENST00000636243 86 ntBASIC3.23□□□□□ -1.89
EPHB3P54753 Y_RNA.229-201ENST00000364347 113 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 RNY4P18-201ENST00000391107 89 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 RNU6-460P-201ENST00000391158 108 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 RNU6-1064P-201ENST00000410626 104 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.22□□□□□ -1.89
EPHB3P54753 AC107083.1-201ENST00000439643 279 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AC004386.2-201ENST00000441858 148 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AC025750.2-201ENST00000442609 450 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.22□□□□□ -1.89
EPHB3P54753 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AP001328.1-201ENST00000528550 176 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.22□□□□□ -1.89
EPHB3P54753 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms