Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-1164P-201ENST00000364428 107 ntBASIC1.07□□□□□ -2.24
SCN4AP35499 RNU6-522P-201ENST00000364497 107 ntBASIC1.07□□□□□ -2.24
SCN4AP35499 RNU6-1215P-201ENST00000384441 102 ntBASIC1.07□□□□□ -2.24
SCN4AP35499 RNA5SP501-201ENST00000410990 112 ntBASIC1.07□□□□□ -2.24
SCN4AP35499 TPT1P7-201ENST00000458300 517 ntBASIC1.07□□□□□ -2.24
SCN4AP35499 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.07□□□□□ -2.24
SCN4AP35499 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.07□□□□□ -2.24
SCN4AP35499 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SCN4AP35499 Y_RNA.9-201ENST00000362354 101 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNY4P14-201ENST00000363656 96 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 Y_RNA.258-201ENST00000364613 105 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 SNORA67.2-201ENST00000384300 149 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNU6-790P-201ENST00000384479 105 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNU6-1235P-201ENST00000384559 107 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNA5SP100-201ENST00000410903 110 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNA5SP59-201ENST00000410922 110 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.06□□□□□ -2.24
SCN4AP35499 NDUFB4P10-201ENST00000452541 359 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNU1-131P-201ENST00000458943 161 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNU6-498P-201ENST00000459468 107 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 MTCO2P30-201ENST00000503662 364 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 AC091435.1-201ENST00000505442 584 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 AC079140.2-201ENST00000506193 142 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 RNU6-720P-201ENST00000516363 108 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 AC025423.5-201ENST00000550230 219 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 AL121757.2-201ENST00000611223 313 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
SCN4AP35499 BX322639.1-202ENST00000423987 2213 ntBASIC1.06□□□□□ -2.24
SCN4AP35499 SNORA72.2-201ENST00000365028 127 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 SNORD116-11-201ENST00000383882 92 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RNU6-418P-201ENST00000384035 107 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 SNORA32.2-201ENST00000384049 122 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RNU2-16P-201ENST00000410712 136 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN4AP35499 RNU6-329P-201ENST00000459618 107 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AC010531.2-201ENST00000465012 153 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 SNORA25.14-201ENST00000516481 132 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RNA5SP476-201ENST00000516613 103 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.05□□□□□ -2.24
SCN4AP35499 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN4AP35499 SNORA43.4-201ENST00000629559 138 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN4AP35499 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SCN4AP35499 Y_RNA.157-201ENST00000363638 102 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 Y_RNA.554-201ENST00000384672 102 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 MIR194-1-201ENST00000384892 85 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RPL21P111-201ENST00000418453 477 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN4AP35499 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.05□□□□□ -2.24
SCN4AP35499 AC112492.4-201ENST00000456549 352 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AC027575.1-201ENST00000481064 460 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AL163195.1-201ENST00000496941 348 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RNU6-612P-201ENST00000516909 102 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 SNORA44.1-201ENST00000517031 108 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.05□□□□□ -2.24
SCN4AP35499 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.05□□□□□ -2.24
SCN4AP35499 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.05□□□□□ -2.24
SCN4AP35499 MZT1P2-201ENST00000604387 248 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 U4.5-201ENST00000617137 123 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AC091925.1-201ENST00000623204 462 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AC068137.4-201ENST00000638485 296 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 AC073869.6-201ENST00000640656 341 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 ZNF204P-201ENST00000416749 2397 ntBASIC1.05□□□□□ -2.24
SCN4AP35499 RNU6-623P-201ENST00000363143 105 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 SNORD32B-201ENST00000364460 84 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 Y_RNA.301-201ENST00000364990 103 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RNU6-877P-201ENST00000383868 107 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SCN4AP35499 RNU6-192P-201ENST00000391253 100 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 MIR320B2-201ENST00000408479 138 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 USMG5P1-201ENST00000425964 177 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN4AP35499 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RNU7-94P-201ENST00000459576 63 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 AC091874.1-201ENST00000511402 339 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 Y_RNA.665-201ENST00000516177 98 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RNU6-1281P-201ENST00000516223 105 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RNU6-344P-201ENST00000516635 111 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RNU6-256P-201ENST00000516747 97 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RRN3P3-201ENST00000549207 578 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN4AP35499 AC100830.2-201ENST00000581636 240 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 AC019193.3-201ENST00000609144 554 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 AC090617.10-201ENST00000624308 134 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 MTND4P5-201ENST00000435821 1374 ntBASIC1.04□□□□□ -2.24
SCN4AP35499 RNU6-112P-201ENST00000363599 104 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 RNU6-414P-201ENST00000363705 104 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 RNU6-1090P-201ENST00000364065 94 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 RNU4-75P-201ENST00000364621 146 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 Y_RNA.490-201ENST00000384413 102 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 RNA5SP219-201ENST00000390940 113 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 RNU6-1093P-201ENST00000391194 107 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 MIR300-201ENST00000401138 83 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 MIR1267-201ENST00000408723 78 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms