Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.64□□□□□ -1.83
NFKB1P19838 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.64□□□□□ -1.83
NFKB1P19838 AL121772.2-201ENST00000614331 297 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.64□□□□□ -1.83
NFKB1P19838 AC090517.3-201ENST00000625170 141 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.64□□□□□ -1.83
NFKB1P19838 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.64□□□□□ -1.83
NFKB1P19838 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NFKB1P19838 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.63□□□□□ -1.83
NFKB1P19838 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NFKB1P19838 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
NFKB1P19838 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NFKB1P19838 AC009487.4-201ENST00000624969 3585 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.63□□□□□ -1.83
NFKB1P19838 Y_RNA.35-201ENST00000362601 101 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 RNU4-13P-201ENST00000364019 141 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 RNU6-647P-201ENST00000364243 107 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 RNU6-234P-201ENST00000365229 104 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 MIR548A3-201ENST00000385297 97 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 RNU2-70P-201ENST00000410718 179 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 AC126124.2-201ENST00000413542 321 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 DBIP2-201ENST00000419076 262 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 AL035423.1-201ENST00000420331 213 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 AC016717.1-201ENST00000448918 286 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 Y_RNA.690-201ENST00000516603 95 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 AC109329.2-201ENST00000519658 482 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 AC091178.2-201ENST00000584401 117 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 uc_338.4-201ENST00000616635 176 ntBASIC3.63□□□□□ -1.83
NFKB1P19838 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.63□□□□□ -1.83
NFKB1P19838 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NFKB1P19838 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NFKB1P19838 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
NFKB1P19838 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NFKB1P19838 RNA5SP124-201ENST00000362739 110 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 Y_RNA.91-201ENST00000363042 107 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 SNORD18B-201ENST00000365659 72 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 MIR181A2-201ENST00000384863 110 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 Y_RNA.651-201ENST00000459380 103 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 RPS26P45-201ENST00000471748 340 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 RPL21P129-201ENST00000491732 478 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.62□□□□□ -1.83
NFKB1P19838 ATP5EP1-201ENST00000510257 156 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 AC025647.1-201ENST00000517879 253 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.62□□□□□ -1.83
NFKB1P19838 AC034105.4-201ENST00000568304 277 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 AC103810.1-201ENST00000579873 453 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 MIR4429-201ENST00000580105 73 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.62□□□□□ -1.83
NFKB1P19838 AL929325.1-201ENST00000603096 117 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 AC004832.5-201ENST00000608677 401 ntBASIC3.62□□□□□ -1.83
NFKB1P19838 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NFKB1P19838 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NFKB1P19838 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NFKB1P19838 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
NFKB1P19838 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.61□□□□□ -1.83
NFKB1P19838 RNU6-1164P-201ENST00000364428 107 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 Y_RNA.634-201ENST00000364811 113 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 SNORD31B-201ENST00000364977 69 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 AC107934.2-201ENST00000518653 310 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 MIR2681-201ENST00000581814 105 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 AC006254.2-201ENST00000603259 279 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 AC096577.2-201ENST00000611455 153 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 U4.6-201ENST00000621618 127 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 AC006111.3-201ENST00000622137 383 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.61□□□□□ -1.83
NFKB1P19838 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NFKB1P19838 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
NFKB1P19838 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.61□□□□□ -1.83
NFKB1P19838 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NFKB1P19838 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NFKB1P19838 Y_RNA.203-201ENST00000364106 102 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 MIR670-201ENST00000390142 98 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 AC245102.2-201ENST00000448956 180 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 AC080013.2-201ENST00000460866 323 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 RNU2-27P-201ENST00000516185 142 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 AC023632.4-201ENST00000517783 191 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 RPL23AP91-201ENST00000569211 455 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 MIR5047-201ENST00000579212 100 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 AC105245.1-201ENST00000581934 244 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 RMST_8.1-201ENST00000610287 165 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 AC022149.2-201ENST00000621061 203 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
NFKB1P19838 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.6□□□□□ -1.83
NFKB1P19838 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NFKB1P19838 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NFKB1P19838 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.83
NFKB1P19838 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NFKB1P19838 RNU6-944P-201ENST00000364023 107 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 RNU6-1274P-201ENST00000384557 107 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 RNU6-1235P-201ENST00000384559 107 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 MIRLET7F2-201ENST00000385277 83 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 RN7SKP202-201ENST00000410439 330 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 AC008134.1-201ENST00000420943 193 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 AC023449.1-201ENST00000454464 154 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.59□□□□□ -1.83
NFKB1P19838 SNORD11-201ENST00000459124 84 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 507 ms