Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC123900.1-201ENST00000420390 96 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTCO3P29-201ENST00000432119 779 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC098614.3-201ENST00000438957 440 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 snoU13.30-201ENST00000458951 104 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPL7P42-201ENST00000481005 679 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 HMGN1P7-201ENST00000491722 313 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL117351.2-201ENST00000513571 157 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORA44.1-201ENST00000517031 108 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-1213P-201ENST00000517075 94 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP490-201ENST00000517141 136 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC105029.1-201ENST00000520250 669 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AK6P2-201ENST00000549020 471 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC026271.5-201ENST00000577873 130 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC005562.2-201ENST00000618264 111 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 ZNF299P-201ENST00000406845 1804 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-545P-201ENST00000362681 104 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP493-201ENST00000364115 91 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-601P-201ENST00000384540 107 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-331P-201ENST00000384724 107 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR32-201ENST00000384965 70 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPL37P10-201ENST00000412884 288 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL139396.1-201ENST00000421137 167 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC004386.2-201ENST00000441858 148 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNRPEP8-201ENST00000442866 260 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU7-14P-201ENST00000459331 62 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU1-54P-201ENST00000517181 120 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RBM11P1-201ENST00000604951 799 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPL17P51-201ENST00000605218 238 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC009229.3-201ENST00000608056 282 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 TCL6_2.1-201ENST00000615162 119 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC092794.2-201ENST00000620933 563 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC099654.5-201ENST00000636479 350 ntBASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.405-201ENST00000383979 100 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.451-201ENST00000384200 100 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.524-201ENST00000384564 100 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.561-201ENST00000384694 100 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR597-201ENST00000384968 97 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR29C-201ENST00000385231 88 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-159P-201ENST00000391080 106 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL357139.1-201ENST00000407792 426 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC107399.1-201ENST00000451226 265 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU1-131P-201ENST00000458943 161 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPS23P5-201ENST00000495419 428 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 FGF7P4-201ENST00000509595 295 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-507P-201ENST00000516045 100 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-120P-201ENST00000516077 103 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-875P-201ENST00000516488 106 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 APOOP3-201ENST00000536787 586 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 UBE2V2P2-201ENST00000587677 504 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL590240.4-201ENST00000616908 390 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.34□□□□□ -2.19
TMX2-CTNND1H3BSU7 LINC02555-201ENST00000563933 1951 ntBASIC1.34□□□□□ -2.2
TMX2-CTNND1H3BSU7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORD115-3-201ENST00000363100 82 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-137P-201ENST00000363680 108 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-1188P-201ENST00000363795 107 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR10B-201ENST00000385011 110 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORA75.4-201ENST00000391278 119 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 HSPE1P21-201ENST00000438283 308 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND2P29-201ENST00000438595 412 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC009237.7-201ENST00000447357 229 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 snoU13.18-201ENST00000459483 104 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU5F-4P-201ENST00000516581 114 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.708-201ENST00000516950 96 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL121579.1-201ENST00000555129 305 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 UBL5P4-201ENST00000562584 236 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR4273-201ENST00000582824 84 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC005730.3-201ENST00000583067 366 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL355802.3-201ENST00000607571 545 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL132765.2-201ENST00000610812 351 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC091895.1-201ENST00000624494 256 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms