Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV13-1A0A0B4J241 AC027288.2-201ENST00000553028 243 ntBASIC-0.27□□□□□ -2.45
TRAV13-1A0A0B4J241 BNIP3P40-201ENST00000596017 556 ntBASIC-0.27□□□□□ -2.45
TRAV13-1A0A0B4J241 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.27□□□□□ -2.45
TRAV13-1A0A0B4J241 AC073544.1-201ENST00000600110 1595 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 RNY1-201ENST00000364228 113 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 MIR193B-201ENST00000384907 83 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 MIR520G-201ENST00000385064 90 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 MIR520H-201ENST00000385126 88 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 RNU6-679P-201ENST00000391003 106 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 MTATP6P20-201ENST00000414147 562 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 AL139396.1-201ENST00000421137 167 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 RPL37P21-201ENST00000435890 276 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 SEPT7P4-201ENST00000437076 306 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 HSFY5P-201ENST00000453726 309 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 HMGN2P26-201ENST00000463169 339 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 AC007215.1-201ENST00000464893 276 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 RNU7-41P-201ENST00000515917 61 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 RNU2-56P-201ENST00000516826 190 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 AC068790.2-201ENST00000602601 557 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 AC138649.3-201ENST00000622154 254 ntBASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.28□□□□□ -2.45
TRAV13-1A0A0B4J241 RNU6-369P-201ENST00000362515 102 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORD118-201ENST00000363593 134 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-344P-201ENST00000516635 111 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-430P-201ENST00000517078 107 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA25.17-201ENST00000517184 124 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 AP003181.2-201ENST00000528941 181 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 FRG2DP-202ENST00000566967 323 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR3678-201ENST00000578455 94 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 AC010620.1-201ENST00000601088 1102 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 RBM11P1-201ENST00000604951 799 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA25.18-201ENST00000607153 114 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 AC022418.1-201ENST00000624118 445 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 AL008636.1-201ENST00000625038 1018 ntBASIC-0.29□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-833P-201ENST00000363486 107 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNA5SP48-201ENST00000363969 126 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-654P-201ENST00000364373 107 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNA5SP482-201ENST00000391269 118 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 AL358176.2-201ENST00000425769 204 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-276P-201ENST00000516114 96 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA19.3-201ENST00000516165 130 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-58P-201ENST00000517143 103 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-323P-201ENST00000521915 107 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 MTND4LP18-201ENST00000526864 291 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR4438-201ENST00000585271 93 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 AC090517.2-201ENST00000614966 680 ntBASIC-0.3□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR330-201ENST00000362196 94 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORD114-26-201ENST00000363543 72 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-137P-201ENST00000363680 108 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA2B-201ENST00000384583 137 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR891A-201ENST00000401237 79 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 RNA5SP494-201ENST00000410653 129 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 RPS27AP14-201ENST00000422868 454 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU1-117P-201ENST00000517041 158 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 AC141557.1-201ENST00000540982 400 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 AC139792.3-201ENST00000623525 224 ntBASIC-0.31□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR520C-201ENST00000385005 87 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 MRPL42P2-201ENST00000403169 426 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR1185-2-201ENST00000408687 86 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 MRPS10P2-201ENST00000431226 381 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 MRPS10P1-201ENST00000448483 130 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA40.12-201ENST00000516329 111 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 MTND5P17-201ENST00000418405 1603 ntBASIC-0.32□□□□□ -2.46
TRAV13-1A0A0B4J241 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 SNORA1B-201ENST00000362535 133 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 RNU6-533P-201ENST00000384144 107 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 MIR562-201ENST00000384894 95 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AL392103.1-201ENST00000447000 198 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC079140.5-201ENST00000507882 310 ntBASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRAV13-1A0A0B4J241 RNA5SP94-201ENST00000516917 108 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms