Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RN7SKP132-201ENST00000516001 208 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 AC026271.5-201ENST00000577873 130 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 AL357075.2-201ENST00000614906 189 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 MIR376A1-201ENST00000616574 68 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC062016.1-201ENST00000355719 319 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-545P-201ENST00000362681 104 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-20P-201ENST00000384106 107 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 SNORD115-46-201ENST00000390982 71 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU2-48P-201ENST00000410694 191 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-130P-201ENST00000411112 103 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 RPL23AP36-201ENST00000413895 458 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC123900.1-201ENST00000420390 96 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC063976.3-201ENST00000426849 329 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC005002.2-201ENST00000438228 269 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 HMGN2P9-201ENST00000476875 229 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC018868.1-201ENST00000491307 315 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDHGA3Q9Y5H0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 RNA5SP126-201ENST00000365092 109 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-975P-201ENST00000384296 105 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-196P-201ENST00000384315 107 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 RNA5SP504-201ENST00000410676 117 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 AC096920.1-201ENST00000423991 241 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 SUMO1P2-201ENST00000452524 304 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 RN7SL20P-201ENST00000488827 297 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 RN7SL633P-201ENST00000488974 297 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 SEPT14P8-201ENST00000508026 178 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 ATP5EP1-201ENST00000510257 156 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 AC025465.3-201ENST00000510570 311 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 MIR4423-201ENST00000580922 80 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 AC006380.1-201ENST00000603598 186 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 SNORD113-5-201ENST00000607261 78 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 AC011373.1-201ENST00000607270 237 ntBASIC2.78□□□□□ -1.96
PCDHGA3Q9Y5H0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-238P-201ENST00000363313 106 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 Y_RNA.144-201ENST00000363521 113 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-961P-201ENST00000363893 105 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-743P-201ENST00000364151 106 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 SNORD87-201ENST00000364849 89 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-463P-201ENST00000384340 107 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 AL451074.5-201ENST00000415894 435 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 IPO7P1-201ENST00000442031 636 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU7-57P-201ENST00000459540 60 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 HMGN1P10-201ENST00000474557 553 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 SNORA4.4-201ENST00000515921 135 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 CYCSP26-201ENST00000534107 320 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 AC007318.2-201ENST00000620999 243 ntBASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDHGA3Q9Y5H0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 AL136360.1-201ENST00000503377 1900 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-21P-201ENST00000384710 107 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 RN7SKP284-201ENST00000411002 343 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 AL109933.2-201ENST00000452651 260 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 LINC01399-202ENST00000458450 244 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-498P-201ENST00000459468 107 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 AP003733.2-201ENST00000529409 171 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR4300-201ENST00000581016 96 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 7SK.10-201ENST00000621414 298 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 snoZ196.1-201ENST00000625269 89 ntBASIC2.76□□□□□ -1.97
PCDHGA3Q9Y5H0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR548B-201ENST00000385247 97 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR1185-2-201ENST00000408687 86 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 AC008134.1-201ENST00000420943 193 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 AL357134.1-201ENST00000445848 426 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 AL161670.1-201ENST00000554348 137 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms