Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MIR147B-201ENST00000390185 80 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 SNORA53-201ENST00000391141 249 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 MTCO1P5-201ENST00000433573 344 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AL121594.1-201ENST00000475906 575 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.07□□□□□ -1.92
KRT40Q6A162 AC018448.1-201ENST00000552843 316 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
KRT40Q6A162 MIR3923-201ENST00000579521 83 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AC005176.2-201ENST00000596933 147 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AC022441.3-201ENST00000605737 136 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AC004792.1-201ENST00000614523 137 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 AL590240.4-201ENST00000616908 390 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.07□□□□□ -1.92
KRT40Q6A162 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
KRT40Q6A162 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRT40Q6A162 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 Y_RNA.29-201ENST00000362570 113 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 SNORD114-19-201ENST00000363072 75 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNU6-727P-201ENST00000363592 107 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNA5SP68-201ENST00000363885 119 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 Y_RNA.331-201ENST00000365267 102 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNU6-1062P-201ENST00000383908 107 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 Y_RNA.555-201ENST00000384673 110 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 SNORA67.4-201ENST00000384688 142 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 AL033519.2-201ENST00000403958 392 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 SNORA3.2-201ENST00000408221 125 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNU6-1199P-201ENST00000411249 104 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RAB28P5-201ENST00000427490 651 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 IFNA11P-201ENST00000446352 526 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 UQCRBP2-201ENST00000447827 297 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RPS3P1-201ENST00000456781 192 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNU6-625P-201ENST00000459412 107 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 AC112771.1-201ENST00000463581 102 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT40Q6A162 SNORD116-28-201ENST00000516123 91 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNA5SP148-201ENST00000516527 94 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 RNU6-182P-201ENST00000516970 105 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT40Q6A162 RPL21P9-201ENST00000556149 474 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 AC027176.1-201ENST00000560204 514 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 AL356575.1-201ENST00000603008 283 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 MIR6817-201ENST00000615588 66 ntBASIC3.06□□□□□ -1.92
KRT40Q6A162 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
KRT40Q6A162 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRT40Q6A162 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRT40Q6A162 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRT40Q6A162 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
KRT40Q6A162 Y_RNA.136-201ENST00000363444 102 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 Y_RNA.150-201ENST00000363562 102 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 Y_RNA.275-201ENST00000364726 110 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.05□□□□□ -1.92
KRT40Q6A162 MIR9-1-201ENST00000385198 89 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 PCNPP3-201ENST00000393579 471 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.05□□□□□ -1.92
KRT40Q6A162 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.05□□□□□ -1.92
KRT40Q6A162 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.05□□□□□ -1.92
KRT40Q6A162 MTND2P29-201ENST00000438595 412 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 AC009237.7-201ENST00000447357 229 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.05□□□□□ -1.92
KRT40Q6A162 AC091959.1-201ENST00000495857 238 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 AC074133.1-201ENST00000515696 183 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 CBX3P4-201ENST00000538909 354 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
KRT40Q6A162 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.05□□□□□ -1.92
KRT40Q6A162 AC091932.3-201ENST00000624223 323 ntBASIC3.05□□□□□ -1.92
KRT40Q6A162 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
KRT40Q6A162 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
KRT40Q6A162 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
KRT40Q6A162 AC099654.7-201ENST00000635788 2127 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 MIR410-201ENST00000362222 80 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 MIR411-201ENST00000362239 96 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 Y_RNA.122-201ENST00000363331 96 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 Y_RNA.383-201ENST00000383855 97 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 RNA5SP504-201ENST00000410676 117 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.04□□□□□ -1.92
KRT40Q6A162 AL390729.2-201ENST00000416137 156 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 AC009963.1-201ENST00000417265 157 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.04□□□□□ -1.92
KRT40Q6A162 AC009414.1-201ENST00000427200 443 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.04□□□□□ -1.92
KRT40Q6A162 AC007536.1-201ENST00000533382 349 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 AC079598.5-201ENST00000547460 117 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 AL162424.1-201ENST00000602325 221 ntBASIC3.04□□□□□ -1.92
KRT40Q6A162 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.04□□□□□ -1.92
KRT40Q6A162 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 UBE2WP1-201ENST00000362030 340 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 Y_RNA.83-201ENST00000363005 113 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 Y_RNA.199-201ENST00000364014 102 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 RNU4-56P-201ENST00000364700 142 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 SNORA14A-201ENST00000364773 135 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 RNY4P28-201ENST00000365281 93 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms