Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.32□□□□□ -2.36
UBBP0CG47 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.32□□□□□ -2.36
UBBP0CG47 AC245047.8-201ENST00000456455 284 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 RNU7-90P-201ENST00000459216 62 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.32□□□□□ -2.36
UBBP0CG47 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.32□□□□□ -2.36
UBBP0CG47 RNU7-99P-201ENST00000516271 62 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 RNA5SP454-201ENST00000517231 127 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 MTND1P5-201ENST00000517906 940 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 AP003716.2-201ENST00000528260 108 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.32□□□□□ -2.36
UBBP0CG47 AC136443.5-201ENST00000603741 370 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 AC064836.2-201ENST00000609491 462 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 AC022306.3-201ENST00000619930 550 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 AL078596.1-201ENST00000624856 447 ntBASIC0.32□□□□□ -2.36
UBBP0CG47 SNORA2.2-201ENST00000365473 135 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 U8.16-201ENST00000391279 133 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.31□□□□□ -2.36
UBBP0CG47 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.31□□□□□ -2.36
UBBP0CG47 MTND3P9-201ENST00000429526 346 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.31□□□□□ -2.36
UBBP0CG47 AL445305.1-201ENST00000432577 575 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 RPEP5-201ENST00000441137 268 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 STAG3L5P-204ENST00000443759 179 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AC074290.1-201ENST00000448883 135 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBBP0CG47 TPT1P7-201ENST00000458300 517 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 SNORD11.1-201ENST00000459482 85 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 OR9P1P-201ENST00000496431 281 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AC022493.2-201ENST00000506122 481 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 RNU6-1129P-201ENST00000515964 104 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 MTND4LP26-201ENST00000518144 282 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.31□□□□□ -2.36
UBBP0CG47 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.31□□□□□ -2.36
UBBP0CG47 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.31□□□□□ -2.36
UBBP0CG47 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.31□□□□□ -2.36
UBBP0CG47 MTATP6P3-201ENST00000581686 676 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 MIR4424-201ENST00000585257 86 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AL162424.1-201ENST00000602325 221 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 Z84480.1-201ENST00000605131 311 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AP001506.1-201ENST00000615444 211 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 AC009161.2-201ENST00000624626 138 ntBASIC0.31□□□□□ -2.36
UBBP0CG47 MIRLET7C-201ENST00000362160 84 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 U3.8-201ENST00000363675 217 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 Y_RNA.338-201ENST00000365320 114 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AL451046.2-201ENST00000403074 277 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 MIR1185-2-201ENST00000408687 86 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AC133104.1-201ENST00000429100 218 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.3□□□□□ -2.36
UBBP0CG47 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.3□□□□□ -2.36
UBBP0CG47 MTCO2P7-201ENST00000446518 666 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AL356010.1-201ENST00000456364 102 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AC022868.1-201ENST00000517767 391 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AC106038.2-201ENST00000520706 568 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AC027419.1-201ENST00000522976 328 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AP002963.1-201ENST00000530590 184 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 SCOCP1-201ENST00000554676 349 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.3□□□□□ -2.36
UBBP0CG47 FGF7P1-201ENST00000582820 288 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AL357312.1-201ENST00000603879 298 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 AC011458.1-201ENST00000604034 617 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.3□□□□□ -2.36
UBBP0CG47 Y_RNA.100-201ENST00000363141 102 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 RNU6-137P-201ENST00000363680 108 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 SNORD115-8-201ENST00000363856 82 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 SNORD115-38-201ENST00000365037 82 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AL049545.1-201ENST00000401856 572 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 CYCSP46-201ENST00000423569 204 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.29□□□□□ -2.36
UBBP0CG47 AC022364.2-201ENST00000457963 554 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 SNORD42A-201ENST00000459584 64 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.29□□□□□ -2.36
UBBP0CG47 SNORA14.1-201ENST00000516113 141 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 RNU6-947P-201ENST00000516264 106 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 RNU6-229P-201ENST00000516614 102 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
UBBP0CG47 HIF1AP1-201ENST00000553642 175 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 MIR3192-201ENST00000584920 77 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AC004223.2-201ENST00000590309 544 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AL512605.2-201ENST00000592972 256 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AL117336.2-201ENST00000602435 335 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AC245014.2-201ENST00000603689 287 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AC246785.4-201ENST00000605374 287 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 U2.17-201ENST00000611454 95 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.29□□□□□ -2.36
UBBP0CG47 HULC.1-201ENST00000612720 240 ntBASIC0.29□□□□□ -2.36
UBBP0CG47 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.29□□□□□ -2.36
UBBP0CG47 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
UBBP0CG47 RNU4-21P-201ENST00000362802 126 ntBASIC0.28□□□□□ -2.36
UBBP0CG47 RNU6-181P-201ENST00000363225 107 ntBASIC0.28□□□□□ -2.36
UBBP0CG47 Y_RNA.123-201ENST00000363338 102 ntBASIC0.28□□□□□ -2.36
UBBP0CG47 RNU6-1317P-201ENST00000364582 104 ntBASIC0.28□□□□□ -2.36
UBBP0CG47 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.28□□□□□ -2.36
UBBP0CG47 MIR526A1-201ENST00000384897 85 ntBASIC0.28□□□□□ -2.36
UBBP0CG47 SNORA40.3-201ENST00000390964 122 ntBASIC0.28□□□□□ -2.36
UBBP0CG47 RNU1-119P-201ENST00000391122 165 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 322.2 ms