Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR378A-201ENST00000362177 66 ntBASIC1.79□□□□□ -2.12
PHF1O43189 Y_RNA.28-201ENST00000362554 111 ntBASIC1.79□□□□□ -2.12
PHF1O43189 Y_RNA.106-201ENST00000363189 100 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNA5SP138-201ENST00000365098 114 ntBASIC1.79□□□□□ -2.12
PHF1O43189 Y_RNA.319-201ENST00000365138 92 ntBASIC1.79□□□□□ -2.12
PHF1O43189 Y_RNA.428-201ENST00000384078 102 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNU6-1032P-201ENST00000384100 107 ntBASIC1.79□□□□□ -2.12
PHF1O43189 Y_RNA.445-201ENST00000384168 102 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNU6-1011P-201ENST00000384668 107 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR489-201ENST00000384923 84 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR10B-201ENST00000385011 110 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR625-201ENST00000385047 85 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR208B-201ENST00000401172 77 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AL023284.1-201ENST00000403956 276 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MCFD2P1-201ENST00000417812 300 ntBASIC1.79□□□□□ -2.12
PHF1O43189 HMGN2P38-201ENST00000423806 265 ntBASIC1.79□□□□□ -2.12
PHF1O43189 EIF1P2-201ENST00000428233 350 ntBASIC1.79□□□□□ -2.12
PHF1O43189 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.79□□□□□ -2.12
PHF1O43189 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.79□□□□□ -2.12
PHF1O43189 MTND4P19-201ENST00000446659 478 ntBASIC1.79□□□□□ -2.12
PHF1O43189 CYP2C59P-201ENST00000457790 269 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AP000870.1-201ENST00000472927 406 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AC018868.1-201ENST00000491307 315 ntBASIC1.79□□□□□ -2.12
PHF1O43189 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.79□□□□□ -2.12
PHF1O43189 RNU6-1114P-201ENST00000516022 107 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNA5SP200-201ENST00000516360 103 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNU4-77P-201ENST00000516692 156 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNU6-1198P-201ENST00000516904 67 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNA5SP54-201ENST00000516951 92 ntBASIC1.79□□□□□ -2.12
PHF1O43189 SNORD116.3-201ENST00000517176 78 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PHF1O43189 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.79□□□□□ -2.12
PHF1O43189 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
PHF1O43189 CBX3P7-201ENST00000532876 502 ntBASIC1.79□□□□□ -2.12
PHF1O43189 GNAI2P1-201ENST00000541815 315 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AC090617.3-201ENST00000573670 475 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR3171-201ENST00000584270 74 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AC002984.1-201ENST00000591692 448 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AC016727.2-201ENST00000603988 621 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AL670379.2-201ENST00000604983 252 ntBASIC1.79□□□□□ -2.12
PHF1O43189 RPL17P51-201ENST00000605218 238 ntBASIC1.79□□□□□ -2.12
PHF1O43189 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.79□□□□□ -2.12
PHF1O43189 MIR1244-1-201ENST00000612829 85 ntBASIC1.79□□□□□ -2.12
PHF1O43189 AC008121.3-201ENST00000618726 433 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.79□□□□□ -2.12
PHF1O43189 MIR1244-3-201ENST00000635744 85 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR4272-201ENST00000635924 64 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR1244-2-201ENST00000636449 85 ntBASIC1.79□□□□□ -2.12
PHF1O43189 MIR1244-4-202ENST00000636813 85 ntBASIC1.79□□□□□ -2.12
PHF1O43189 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
PHF1O43189 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PHF1O43189 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PHF1O43189 RNU1-76P-201ENST00000362903 159 ntBASIC1.78□□□□□ -2.12
PHF1O43189 Y_RNA.132-201ENST00000363421 102 ntBASIC1.78□□□□□ -2.12
PHF1O43189 Y_RNA.148-201ENST00000363557 117 ntBASIC1.78□□□□□ -2.12
PHF1O43189 SNORA25.9-201ENST00000365087 128 ntBASIC1.78□□□□□ -2.12
PHF1O43189 Y_RNA.326-201ENST00000365176 113 ntBASIC1.78□□□□□ -2.12
PHF1O43189 RNA5SP240-201ENST00000365355 128 ntBASIC1.78□□□□□ -2.12
PHF1O43189 RNU6-245P-201ENST00000384020 107 ntBASIC1.78□□□□□ -2.12
PHF1O43189 MIR518E-201ENST00000385252 88 ntBASIC1.78□□□□□ -2.12
PHF1O43189 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PHF1O43189 SNORA12-201ENST00000391162 147 ntBASIC1.78□□□□□ -2.12
PHF1O43189 Y_RNA.592-201ENST00000410274 109 ntBASIC1.78□□□□□ -2.12
PHF1O43189 Y_RNA.597-201ENST00000410463 100 ntBASIC1.78□□□□□ -2.12
PHF1O43189 TOMM22P6-201ENST00000465035 409 ntBASIC1.78□□□□□ -2.12
PHF1O43189 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.78□□□□□ -2.12
PHF1O43189 SCARNA16.3-201ENST00000516595 184 ntBASIC1.78□□□□□ -2.12
PHF1O43189 RN7SKP295-201ENST00000517264 153 ntBASIC1.78□□□□□ -2.12
PHF1O43189 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.78□□□□□ -2.12
PHF1O43189 AC026470.2-201ENST00000561492 181 ntBASIC1.78□□□□□ -2.12
PHF1O43189 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.78□□□□□ -2.12
PHF1O43189 AC008749.1-201ENST00000597650 306 ntBASIC1.78□□□□□ -2.12
PHF1O43189 SNORD58B-201ENST00000607313 66 ntBASIC1.78□□□□□ -2.12
PHF1O43189 MIR8070-201ENST00000616510 88 ntBASIC1.78□□□□□ -2.12
PHF1O43189 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
PHF1O43189 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.78□□□□□ -2.12
PHF1O43189 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PHF1O43189 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.78□□□□□ -2.13
PHF1O43189 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.77□□□□□ -2.13
PHF1O43189 RNU6-222P-201ENST00000362438 107 ntBASIC1.77□□□□□ -2.13
PHF1O43189 Y_RNA.80-201ENST00000362996 102 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNU1-23P-201ENST00000363361 144 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
PHF1O43189 SNORA48.3-201ENST00000391081 134 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNU6-1093P-201ENST00000391194 107 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNU6-321P-201ENST00000410912 106 ntBASIC1.77□□□□□ -2.13
PHF1O43189 AC004866.1-201ENST00000411748 78 ntBASIC1.77□□□□□ -2.13
PHF1O43189 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.77□□□□□ -2.13
PHF1O43189 AC092423.1-201ENST00000430165 186 ntBASIC1.77□□□□□ -2.13
PHF1O43189 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.77□□□□□ -2.13
PHF1O43189 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.77□□□□□ -2.13
PHF1O43189 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
PHF1O43189 AC112492.4-201ENST00000456549 352 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
PHF1O43189 AL163540.1-201ENST00000485382 386 ntBASIC1.77□□□□□ -2.13
PHF1O43189 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.77□□□□□ -2.13
PHF1O43189 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms