Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 MIR3925-201ENST00000584674 77 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AL390208.1-201ENST00000605885 644 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AC010133.1-201ENST00000615809 842 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AC093726.3-201ENST00000637588 150 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 MIR148A-201ENST00000362215 68 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 RNU4-56P-201ENST00000364700 142 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-534P-201ENST00000364877 106 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 AC079354.2-201ENST00000453523 154 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 AC004217.3-201ENST00000551552 878 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 AL391840.1-201ENST00000571144 367 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 MIR4782-201ENST00000577987 79 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 AL096861.1-201ENST00000610899 123 ntBASIC-1.41□□□□□ -2.64
NRXN3Q9Y4C0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-199P-201ENST00000362954 107 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 FCF1P10-201ENST00000407590 479 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-528P-201ENST00000516926 100 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 AC026421.1-201ENST00000519101 163 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 SEC63P2-201ENST00000503863 1939 ntBASIC-1.42□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-369P-201ENST00000362515 102 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 SNORA2.2-201ENST00000365473 135 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 MIR1185-1-201ENST00000408598 86 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 GPM6BP2-201ENST00000432046 144 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 GPM6BP1-201ENST00000446387 144 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 MTCO3P27-201ENST00000514397 196 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 MIR3192-201ENST00000584920 77 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 AP003072.5-201ENST00000623872 773 ntBASIC-1.43□□□□□ -2.64
NRXN3Q9Y4C0 MIR340-201ENST00000362125 95 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 SNORD100-201ENST00000408573 76 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 AC010154.1-201ENST00000425857 269 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 TPT1P7-201ENST00000458300 517 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-977P-201ENST00000516411 103 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 RNA5SP33-201ENST00000516687 98 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 AL603758.1-201ENST00000618654 241 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-878P-201ENST00000384578 110 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 SNRPEP8-201ENST00000442866 260 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.44□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 SNORA72.2-201ENST00000365028 127 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 RNU4-66P-201ENST00000365199 138 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-47P-201ENST00000383866 107 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 AC068135.1-201ENST00000446164 246 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 BTF3P15-201ENST00000455606 336 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 XACT-201ENST00000468762 497 ntTSL 5 BASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 SNORA18.4-201ENST00000516440 124 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 AC012507.3-201ENST00000603556 477 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 AC004223.4-201ENST00000612426 332 ntBASIC-1.45□□□□□ -2.64
NRXN3Q9Y4C0 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-447P-201ENST00000410293 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-355P-201ENST00000410427 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-791P-201ENST00000410467 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-860P-201ENST00000410860 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-785P-201ENST00000411324 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 RPS23P5-201ENST00000495419 428 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 AC025459.1-201ENST00000504072 156 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 U6.90-201ENST00000614007 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 U6.70-201ENST00000620287 104 ntBASIC-1.46□□□□□ -2.64
NRXN3Q9Y4C0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 SNORA72.1-201ENST00000363485 129 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 RNY4P7-201ENST00000364600 96 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 RNU2-23P-201ENST00000410545 195 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 snoU13.14-201ENST00000459372 104 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 AC092104.1-201ENST00000497346 1441 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 MIR3152-201ENST00000579801 74 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 AL513423.1-201ENST00000621695 132 ntBASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.47□□□□□ -2.64
NRXN3Q9Y4C0 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.48□□□□□ -2.65
NRXN3Q9Y4C0 RNU6-796P-201ENST00000391086 107 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms