Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 RPL21P10-201ENST00000463521 490 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 AC091021.1-201ENST00000468051 388 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 RNU7-200P-201ENST00000516105 62 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 MIR3144-201ENST00000579460 79 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 AC004832.5-201ENST00000608677 401 ntBASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
YIPF4Q9BSR8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 snoU2_19.1-201ENST00000362361 80 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 RNU6-805P-201ENST00000365643 106 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 RNU6-1264P-201ENST00000383891 107 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 SNORA67.2-201ENST00000384300 149 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 AL357075.1-201ENST00000404107 726 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 BTF3P11-201ENST00000426582 477 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 SUMO2P18-201ENST00000518873 252 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 MIR5692C2-201ENST00000577959 77 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 MIR5739-201ENST00000619803 80 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
YIPF4Q9BSR8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 Y_RNA.262-201ENST00000364641 102 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 RNY1P5-201ENST00000383890 115 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 Y_RNA.398-201ENST00000383952 99 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AL357139.1-201ENST00000407792 426 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 U3.40-201ENST00000408706 208 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AC140059.1-201ENST00000489238 361 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 RNU6-344P-201ENST00000516635 111 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 MIR3200-201ENST00000580767 85 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 MIR3117-201ENST00000584034 78 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 AC069528.2-201ENST00000624849 1991 ntBASIC3.2□□□□□ -1.9
YIPF4Q9BSR8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 Y_RNA.8-201ENST00000362353 102 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RNU1-72P-201ENST00000362976 153 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 U3.9-201ENST00000363823 204 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 SNORD115-30-201ENST00000364117 82 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 SNORD113-1-201ENST00000365321 69 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RNU6-1310P-201ENST00000384153 107 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RNU6-763P-201ENST00000390865 106 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RNA5SP293-201ENST00000410527 113 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 Z92545.1-201ENST00000411782 234 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 AC092427.1-202ENST00000430569 476 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 CYP2C59P-201ENST00000457790 269 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 U8.19-201ENST00000459095 133 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RPS29P26-201ENST00000477483 171 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 RNU1-117P-201ENST00000517041 158 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 SNORD11B-201ENST00000607707 90 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 TCL6_2.1-201ENST00000615162 119 ntBASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF4Q9BSR8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 RNU6-801P-201ENST00000364087 105 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 RNA5SP267-201ENST00000364893 126 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 AP002088.1-201ENST00000382740 395 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 RNA5SP475-201ENST00000410568 110 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 CYCSP4-201ENST00000429682 331 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 AL445687.1-201ENST00000439946 251 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 RNU6-107P-201ENST00000516643 102 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 SCARNA13-201ENST00000516672 275 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 AP005660.1-201ENST00000522972 293 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 MIR5006-201ENST00000583027 110 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 AL713866.2-201ENST00000603579 219 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 AC068205.3-201ENST00000636385 468 ntBASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF4Q9BSR8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF4Q9BSR8 RNU6-1180P-201ENST00000364935 107 ntBASIC3.17□□□□□ -1.9
YIPF4Q9BSR8 RNA5SP240-201ENST00000365355 128 ntBASIC3.17□□□□□ -1.9
YIPF4Q9BSR8 Y_RNA.441-201ENST00000384123 112 ntBASIC3.17□□□□□ -1.9
YIPF4Q9BSR8 RNU6-220P-201ENST00000390919 107 ntBASIC3.17□□□□□ -1.9
YIPF4Q9BSR8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 515.5 ms