Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MIR3662-201ENST00000637030 95 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NPAS2Q99743 AC027514.1-201ENST00000588561 1603 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 Y_RNA.6-201ENST00000362350 114 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 RNU6-562P-201ENST00000362731 107 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 Y_RNA.132-201ENST00000363421 102 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 Y_RNA.151-201ENST00000363566 112 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 RNU6-1019P-201ENST00000364424 107 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 Y_RNA.530-201ENST00000384587 101 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 RNU6-95P-201ENST00000384697 107 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 MIR300-201ENST00000401138 83 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 AL513185.2-201ENST00000425543 193 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 HSPE1P9-201ENST00000440046 311 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.39□□□□□ -2.19
NPAS2Q99743 MTCO1P29-201ENST00000496868 288 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 AC011352.1-201ENST00000512300 793 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 RNU2-34P-201ENST00000516534 121 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 RNU6-256P-201ENST00000516747 97 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 CPDP1-201ENST00000579660 283 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 MIR3672-201ENST00000584290 82 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 MIR3942-201ENST00000585264 109 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 AL512598.1-201ENST00000610158 273 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 AL359697.1-201ENST00000624879 587 ntBASIC1.39□□□□□ -2.19
NPAS2Q99743 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.39□□□□□ -2.19
NPAS2Q99743 Y_RNA.100-201ENST00000363141 102 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 RNY1P10-201ENST00000363268 113 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 Y_RNA.414-201ENST00000384011 101 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 SNORA29-201ENST00000384183 140 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 MIR549A-201ENST00000385268 96 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 AC007098.1-201ENST00000420122 367 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 MTND1P4-201ENST00000435196 415 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 MTND1P34-201ENST00000438556 671 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 AC069257.2-201ENST00000441819 155 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 MTND1P11-201ENST00000456661 876 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 RPS29P25-201ENST00000481709 171 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.38□□□□□ -2.19
NPAS2Q99743 RNU6-1314P-201ENST00000517139 104 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 MTND1P5-201ENST00000517906 940 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 AP000907.4-201ENST00000604143 237 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 AL138726.1-201ENST00000614873 333 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 MIR8070-201ENST00000616510 88 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.38□□□□□ -2.19
NPAS2Q99743 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NPAS2Q99743 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NPAS2Q99743 MIR302D-201ENST00000362275 68 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNU6-862P-201ENST00000362804 105 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNU6-271P-201ENST00000363858 105 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 Y_RNA.212-201ENST00000364177 102 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 SNORA63D-201ENST00000364359 132 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNU6-128P-201ENST00000383976 107 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNU6-933P-201ENST00000384424 107 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNU6-790P-201ENST00000384479 105 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 Y_RNA.573-201ENST00000384763 105 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 AC092473.1-201ENST00000441098 221 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.37□□□□□ -2.19
NPAS2Q99743 RPS26P55-201ENST00000471178 356 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 TRBVA-201ENST00000498804 316 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.37□□□□□ -2.19
NPAS2Q99743 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
NPAS2Q99743 AC067942.3-201ENST00000512025 362 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNA5SP437-201ENST00000517249 129 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.37□□□□□ -2.19
NPAS2Q99743 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.37□□□□□ -2.19
NPAS2Q99743 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.37□□□□□ -2.19
NPAS2Q99743 AL353149.1-201ENST00000610667 244 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 AC098679.4-201ENST00000624241 654 ntBASIC1.37□□□□□ -2.19
NPAS2Q99743 RNU6-968P-201ENST00000384076 107 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RNU6-831P-201ENST00000384548 107 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RNU6-306P-201ENST00000384617 107 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 MIR487A-201ENST00000385009 80 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RNU6-1093P-201ENST00000391194 107 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RNU2-7P-201ENST00000410794 178 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RNU6-373P-201ENST00000411247 98 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RPS26P42-201ENST00000413485 326 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.36□□□□□ -2.19
NPAS2Q99743 AF186996.7-201ENST00000492781 209 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 AC069439.1-201ENST00000494739 167 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.36□□□□□ -2.19
NPAS2Q99743 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 DEFB131C-201ENST00000528817 165 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 AC026470.2-201ENST00000561492 181 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 AL133215.3-201ENST00000609801 448 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 MIR8076-201ENST00000611401 83 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 AC007014.2-201ENST00000615581 479 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
NPAS2Q99743 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
NPAS2Q99743 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
NPAS2Q99743 RNU5B-2P-201ENST00000363036 113 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms