Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC068700.1-201ENST00000565862 3754 ntBASIC3.35□□□□□ -1.87
EPHB3P54753 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
EPHB3P54753 AC134026.1-201ENST00000623249 2239 ntBASIC3.35□□□□□ -1.87
EPHB3P54753 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EPHB3P54753 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
EPHB3P54753 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EPHB3P54753 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EPHB3P54753 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.34□□□□□ -1.87
EPHB3P54753 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
EPHB3P54753 RNU6-727P-201ENST00000363592 107 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 Y_RNA.172-201ENST00000363765 102 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 RNU6-80P-201ENST00000384195 107 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 SNORA8.3-201ENST00000384679 139 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 AL355497.1-201ENST00000406262 551 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 CYCSP48-201ENST00000417124 323 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.34□□□□□ -1.87
EPHB3P54753 AP001486.1-201ENST00000463339 476 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 RPL30P14-201ENST00000482744 348 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 RNU6-581P-201ENST00000516214 105 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 AC109810.1-201ENST00000534066 224 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.34□□□□□ -1.87
EPHB3P54753 MIR3136-201ENST00000583498 78 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 UBL5P2-201ENST00000583788 219 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 SNRPGP20-201ENST00000604477 205 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 uc_338.25-201ENST00000613756 156 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 AL138880.2-201ENST00000616214 239 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 AC006111.3-201ENST00000622137 383 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
EPHB3P54753 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EPHB3P54753 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EPHB3P54753 AC002543.1-201ENST00000299783 1954 ntBASIC3.34□□□□□ -1.88
EPHB3P54753 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
EPHB3P54753 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.34□□□□□ -1.88
EPHB3P54753 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EPHB3P54753 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHB3P54753 Y_RNA.337-201ENST00000365312 102 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 Y_RNA.420-201ENST00000384043 110 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 COTL1P1-201ENST00000422309 375 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
EPHB3P54753 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.33□□□□□ -1.88
EPHB3P54753 RNU7-197P-201ENST00000458836 62 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 AC146507.2-201ENST00000460608 476 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 YWHAEP4-201ENST00000505390 198 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.33□□□□□ -1.88
EPHB3P54753 RNU6-1234P-201ENST00000516877 103 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 ACA59.2-201ENST00000517061 156 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 AC021739.1-201ENST00000559631 174 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 LARP7P3-201ENST00000579888 337 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 SNORD98-201ENST00000636377 67 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 AC010329.5-201ENST00000623497 2174 ntBASIC3.33□□□□□ -1.88
EPHB3P54753 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
EPHB3P54753 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHB3P54753 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
EPHB3P54753 RNU6-324P-201ENST00000363957 106 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 SNORD115-30-201ENST00000364117 82 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 Y_RNA.287-201ENST00000364853 94 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 SNORA72.4-201ENST00000384174 132 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 Y_RNA.542-201ENST00000384641 111 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 SNORA20-201ENST00000384662 132 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 MIR208B-201ENST00000401172 77 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHB3P54753 BPY2DP-201ENST00000422208 265 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
EPHB3P54753 AC012308.1-201ENST00000451232 178 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 RNU6-1211P-201ENST00000459179 105 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 AL049873.1-201ENST00000480540 376 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 AC103975.1-201ENST00000482506 483 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 AC008885.1-201ENST00000514930 301 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 Y_RNA.686-201ENST00000516548 134 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 AC112693.2-201ENST00000556538 232 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 TUG1_4.1-201ENST00000619464 181 ntBASIC3.32□□□□□ -1.88
EPHB3P54753 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHB3P54753 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
EPHB3P54753 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPHB3P54753 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHB3P54753 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EPHB3P54753 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHB3P54753 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHB3P54753 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 Y_RNA.563-201ENST00000384707 108 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 MIR616-201ENST00000385293 97 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHB3P54753 AL031003.1-201ENST00000404229 172 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AC099548.1-201ENST00000421443 426 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 RPS29P20-201ENST00000489592 171 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AIG1P1-201ENST00000503376 148 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AC006445.2-201ENST00000510061 472 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AC006199.1-201ENST00000548728 219 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AC099778.2-201ENST00000610904 211 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 AL391903.3-201ENST00000612158 163 ntBASIC3.31□□□□□ -1.88
EPHB3P54753 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms