Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SCN4AP35499 USP9YP14-201ENST00000430663 563 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN4AP35499 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.15□□□□□ -2.23
SCN4AP35499 RNU7-187P-201ENST00000458985 68 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN4AP35499 RNU6-566P-201ENST00000516790 107 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN4AP35499 ZNF519P2-201ENST00000557032 169 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN4AP35499 MIR5006-201ENST00000583027 110 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 RPL17P51-201ENST00000605218 238 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 AC080013.6-201ENST00000606185 215 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 SNORD14A-201ENST00000606526 91 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 AC064807.4-201ENST00000607201 407 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.15□□□□□ -2.23
SCN4AP35499 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 AC130454.1-201ENST00000622948 401 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SCN4AP35499 RNU6-743P-201ENST00000364151 106 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 RNU6-1329P-201ENST00000365664 107 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 EIF4E2P1-201ENST00000393781 255 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCN4AP35499 AL117339.3-201ENST00000418733 162 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 UBE2V1P4-201ENST00000425374 344 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 AL353572.1-201ENST00000442490 417 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN4AP35499 RNU6-1088P-201ENST00000516850 104 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 MIR3169-201ENST00000578032 83 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 MIR5583-1-201ENST00000580941 59 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN4AP35499 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCN4AP35499 AC024614.3-201ENST00000637860 256 ntBASIC1.14□□□□□ -2.23
SCN4AP35499 Y_RNA.99-201ENST00000363138 105 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 RNU6-1019P-201ENST00000364424 107 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 RNU4-24P-201ENST00000364565 139 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 Y_RNA.256-201ENST00000364594 104 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 RNU6-245P-201ENST00000384020 107 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 MIR517A-201ENST00000385001 87 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SCN4AP35499 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.13□□□□□ -2.23
SCN4AP35499 MTCO1P20-201ENST00000425366 358 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCN4AP35499 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN4AP35499 RPL23AP6-201ENST00000446637 472 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN4AP35499 RNU7-66P-201ENST00000459469 62 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 RNU6-1098P-201ENST00000516772 96 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 RNU6-667P-201ENST00000517186 102 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN4AP35499 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN4AP35499 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.13□□□□□ -2.23
SCN4AP35499 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN4AP35499 AL118558.2-201ENST00000556294 238 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 AC137590.2-201ENST00000619709 240 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 U1.36-201ENST00000620684 176 ntBASIC1.13□□□□□ -2.23
SCN4AP35499 SNORD115-3-201ENST00000363100 82 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 Y_RNA.373-201ENST00000365600 103 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 SNORA12.2-201ENST00000391040 156 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 MTCO3P40-201ENST00000392516 676 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC009310.1-201ENST00000414414 451 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC244636.1-201ENST00000421152 228 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.12□□□□□ -2.23
SCN4AP35499 AL606489.2-201ENST00000433886 234 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC092989.1-201ENST00000481235 277 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.12□□□□□ -2.23
SCN4AP35499 SNORA31.17-201ENST00000516953 127 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 RNU6-323P-201ENST00000521915 107 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.12□□□□□ -2.23
SCN4AP35499 AC233702.2-202ENST00000562547 291 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN4AP35499 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.12□□□□□ -2.23
SCN4AP35499 MIR6513-201ENST00000621188 64 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC099654.12-201ENST00000639868 649 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 RNU6-545P-201ENST00000362681 104 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 SNORD1A-201ENST00000364968 72 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 RNU6-716P-201ENST00000365621 103 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 RNU6-1286P-201ENST00000383871 107 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SCN4AP35499 MIR934-201ENST00000401241 83 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 RNU6-325P-201ENST00000411132 105 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN4AP35499 AL359672.1-201ENST00000442302 409 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AL035666.1-201ENST00000446195 348 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 SNORD5.1-201ENST00000458800 75 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 CCDC34P1-201ENST00000507441 517 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC025465.4-201ENST00000513422 638 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 RNA5SP330-201ENST00000517096 96 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN4AP35499 AC010525.2-201ENST00000590920 195 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 AC063943.3-201ENST00000615562 356 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN4AP35499 AL159152.1-201ENST00000635019 2587 ntBASIC1.12□□□□□ -2.23
SCN4AP35499 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.12□□□□□ -2.23
SCN4AP35499 AC018630.2-201ENST00000534866 2403 ntBASIC1.11□□□□□ -2.23
SCN4AP35499 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SCN4AP35499 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SCN4AP35499 AC012306.1-201ENST00000423267 114 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms