Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-1062P-201ENST00000383908 107 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 Y_RNA.399-201ENST00000383955 105 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNU6-482P-201ENST00000391068 107 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 SNORA46.1-201ENST00000391069 153 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 CBX3P9-201ENST00000402326 552 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNU2-64P-201ENST00000411315 191 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC13P31276 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC13P31276 MTND5P15-201ENST00000434246 349 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 AC007969.2-201ENST00000441891 191 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNU6-1132P-201ENST00000459214 107 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 snoU13.14-201ENST00000459372 104 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 HMGB3P17-201ENST00000504195 649 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 MRPS17P9-201ENST00000511924 393 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNU4-77P-201ENST00000516692 156 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNU6-323P-201ENST00000521915 107 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC13P31276 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC13P31276 MIR3128-201ENST00000581957 66 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 AC125232.2-201ENST00000592457 143 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC13P31276 AC010615.1-201ENST00000594254 1764 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 Y_RNA.106-201ENST00000363189 100 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 Y_RNA.461-201ENST00000384263 103 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 RNU6-472P-201ENST00000384299 107 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 RNU6-95P-201ENST00000384697 107 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 RNU6-713P-201ENST00000384761 107 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 MIR544A-201ENST00000384855 91 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 MT-TW-201ENST00000387382 68 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 USMG5P1-201ENST00000425964 177 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AC087884.1-201ENST00000469738 328 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 SNORA14.1-201ENST00000516113 141 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 RNU6-1069P-201ENST00000516612 133 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AC069113.1-201ENST00000517763 267 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC13P31276 AC023157.2-201ENST00000540596 141 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AC090115.3-201ENST00000553218 849 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.34□□□□□ -2.03
HOXC13P31276 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC13P31276 AC011494.1-201ENST00000596454 237 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AL353997.5-201ENST00000618886 171 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AC137590.2-201ENST00000619709 240 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 AL606534.2-204ENST00000635008 178 ntBASIC2.34□□□□□ -2.03
HOXC13P31276 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HOXC13P31276 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC13P31276 AL157777.2-201ENST00000258070 137 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.39-201ENST00000362620 98 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.40-201ENST00000362645 93 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.60-201ENST00000362831 98 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.152-201ENST00000363578 100 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.314-201ENST00000365114 102 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.350-201ENST00000365409 98 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 SNORD14.1-201ENST00000365609 90 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.483-201ENST00000384380 101 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 MIR29C-201ENST00000385231 88 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AL033519.2-201ENST00000403958 392 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 RNU2-38P-201ENST00000410856 79 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 SNORD56-201ENST00000413522 71 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 CYCSP49-201ENST00000420810 319 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC13P31276 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC13P31276 AL137159.1-201ENST00000452808 512 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC13P31276 SNORD127-201ENST00000458892 86 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 RPL30P1-201ENST00000488676 339 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 HMGB1P35-201ENST00000503360 598 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AC105758.1-201ENST00000506038 399 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 MTND1P19-201ENST00000511780 315 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.676-201ENST00000516393 96 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC13P31276 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC13P31276 AC026371.1-201ENST00000551867 419 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC13P31276 AL355297.3-201ENST00000604082 446 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AL021879.1-201ENST00000611756 288 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 AC097372.5-201ENST00000623665 376 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
HOXC13P31276 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC13P31276 Y_RNA.26-201ENST00000362539 101 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 RNU6-105P-201ENST00000363909 104 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 RNY3P11-201ENST00000364153 102 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 Y_RNA.380-201ENST00000365663 111 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC13P31276 RNU6-128P-201ENST00000383976 107 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 RPL21P1-201ENST00000399532 476 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC13P31276 MIR548M-201ENST00000408260 86 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 MIR1302-6-201ENST00000408466 90 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 HMGN2P38-201ENST00000423806 265 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC13P31276 AL353689.1-201ENST00000438895 199 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 AC112492.4-201ENST00000456549 352 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 SNORD5.1-201ENST00000458800 75 ntBASIC2.32□□□□□ -2.04
HOXC13P31276 RNU7-167P-201ENST00000459160 62 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms