Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 HMGN2P9-201ENST00000476875 229 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 SRIP1-201ENST00000489235 288 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.16□□□□□ -1.9
NPHS1O60500 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHS1O60500 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHS1O60500 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHS1O60500 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHS1O60500 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
NPHS1O60500 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPHS1O60500 RNU6-486P-201ENST00000363116 107 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 Y_RNA.412-201ENST00000384001 104 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 RNU6-1274P-201ENST00000384557 107 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 RNU6-710P-201ENST00000410424 105 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHS1O60500 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHS1O60500 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.15□□□□□ -1.91
NPHS1O60500 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHS1O60500 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHS1O60500 U3.45-201ENST00000607547 219 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 AC108706.1-201ENST00000611053 297 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 AC013791.1-201ENST00000616619 62 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 AC132825.6-201ENST00000638861 357 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.91
NPHS1O60500 MAPK10-362ENST00000641864 4484 ntBASIC3.15□□□□□ -1.91
NPHS1O60500 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPHS1O60500 AC093831.2-201ENST00000624393 3427 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 RNU1-72P-201ENST00000362976 153 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 RNU6-944P-201ENST00000364023 107 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 RNU4-10P-201ENST00000364383 140 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 Y_RNA.287-201ENST00000364853 94 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 Y_RNA.361-201ENST00000365515 120 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 Y_RNA.368-201ENST00000365547 113 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 SNORA72.4-201ENST00000384174 132 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
NPHS1O60500 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 RN7SL75P-201ENST00000461926 281 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.14□□□□□ -1.91
NPHS1O60500 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.14□□□□□ -1.91
NPHS1O60500 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
NPHS1O60500 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
NPHS1O60500 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPHS1O60500 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPHS1O60500 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPHS1O60500 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
NPHS1O60500 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 Y_RNA.182-201ENST00000363880 111 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 Y_RNA.272-201ENST00000364696 102 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 Y_RNA.310-201ENST00000365063 113 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 Y_RNA.341-201ENST00000365341 102 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 RNU6-1130P-201ENST00000365434 107 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 RNU6-381P-201ENST00000391259 108 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 AL139095.1-201ENST00000404326 391 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 MIR1294-201ENST00000408503 142 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 MIR1185-2-201ENST00000408687 86 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 RNU6-1328P-201ENST00000410938 106 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 TRIAP1P1-201ENST00000427062 225 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 TMSB4XP3-201ENST00000445144 114 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 AL133547.1-201ENST00000448546 220 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 RNU7-14P-201ENST00000459331 62 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.13□□□□□ -1.91
NPHS1O60500 AC006130.2-201ENST00000586202 326 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.13□□□□□ -1.91
NPHS1O60500 AC023043.3-201ENST00000593113 385 ntBASIC3.13□□□□□ -1.91
NPHS1O60500 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHS1O60500 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
NPHS1O60500 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
NPHS1O60500 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPHS1O60500 RNA5SP124-201ENST00000362739 110 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 MIR613-201ENST00000385248 95 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 MIR1283-1-201ENST00000408494 87 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHS1O60500 AL606753.1-201ENST00000427435 87 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 RPS20P10-201ENST00000451209 253 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 RPS27AP9-201ENST00000477681 438 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 SCARNA11.3-201ENST00000517276 130 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 AC021269.2-201ENST00000532318 330 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 AL713866.2-201ENST00000603579 219 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.12□□□□□ -1.91
NPHS1O60500 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
NPHS1O60500 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
NPHS1O60500 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPHS1O60500 Y_RNA.75-201ENST00000362927 97 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 Y_RNA.121-201ENST00000363309 113 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 Y_RNA.172-201ENST00000363765 102 ntBASIC3.11□□□□□ -1.91
NPHS1O60500 Y_RNA.293-201ENST00000364908 93 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms