Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 SCARNA14-201ENST00000516903 136 ntBASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 AC100770.1-201ENST00000532310 322 ntBASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 Z73965.1-201ENST00000623412 2297 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-349P-201ENST00000362402 107 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 SNORA5A-201ENST00000384111 134 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 Y_RNA.531-201ENST00000384589 121 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-57P-201ENST00000411348 103 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 RNU2-11P-201ENST00000459191 187 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 PPIAP15-201ENST00000479662 484 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-1098P-201ENST00000516772 96 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-1073P-201ENST00000517182 106 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 MIR4694-201ENST00000578534 80 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 MIR4472-2-201ENST00000582069 67 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 AC012493.2-201ENST00000595083 291 ntBASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC61Q9Y6R9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 AC139713.2-215ENST00000641428 5037 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 snoU2_19.1-201ENST00000362361 80 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-219P-201ENST00000364728 107 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-652P-201ENST00000365488 107 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-1104P-201ENST00000384723 104 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 MIR7-3-201ENST00000384898 110 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 SNORA11.1-201ENST00000408133 129 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 PRSS3P4-201ENST00000453323 162 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 RNU7-123P-201ENST00000515911 60 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 RNU7-70P-201ENST00000516941 66 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 AC009093.8-201ENST00000641769 292 ntBASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC61Q9Y6R9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 RNA5SP97-201ENST00000365006 84 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 SNORD115-35-201ENST00000365122 82 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 Y_RNA.454-201ENST00000384224 113 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 BTF3P4-201ENST00000418852 495 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 VDAC1P3-201ENST00000434069 851 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 RPS29P21-201ENST00000496272 170 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 Y_RNA.666-201ENST00000516187 112 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 RNU7-6P-201ENST00000516845 62 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 AC068657.1-201ENST00000520807 306 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 MIR3936-201ENST00000584304 110 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 FAS-AS1.2-201ENST00000620386 170 ntBASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC61Q9Y6R9 Y_RNA.242-201ENST00000364473 110 ntBASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 AC083863.1-201ENST00000438811 231 ntBASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 SNRPGP13-201ENST00000442212 177 ntBASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 NDUFA4P2-201ENST00000489989 244 ntBASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 AC022523.2-201ENST00000561045 150 ntBASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC61Q9Y6R9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-832P-201ENST00000363319 107 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 Y_RNA.190-201ENST00000363964 101 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 Y_RNA.333-201ENST00000365274 102 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 SNORA2.2-201ENST00000365473 135 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-975P-201ENST00000384296 105 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 MIR124-3-201ENST00000384866 87 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 MIR889-201ENST00000401280 79 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 GNG5P5-201ENST00000420444 220 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AL133162.1-201ENST00000463228 453 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC084357.1-201ENST00000473404 255 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 SNORD19.2-201ENST00000516978 73 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC004486.1-201ENST00000546846 233 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC091152.3-201ENST00000604227 325 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 RNU1-30P-201ENST00000606575 163 ntBASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC61Q9Y6R9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 SNORA18-201ENST00000384416 132 ntBASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 MIR548A2-201ENST00000384956 97 ntBASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 RNU6-928P-201ENST00000516876 104 ntBASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 AC096577.2-201ENST00000611455 153 ntBASIC5.4□□□□□ -1.54
CCDC61Q9Y6R9 AC006504.1-201ENST00000562493 3666 ntBASIC5.4□□□□□ -1.55
CCDC61Q9Y6R9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC61Q9Y6R9 AC068254.2-201ENST00000623938 3577 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms