Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SUMO2P16-201ENST00000519475 264 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 SCOCP1-201ENST00000554676 349 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC104984.5-201ENST00000586878 94 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AL929325.1-201ENST00000603096 117 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC092747.3-201ENST00000603769 301 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC097065.2-201ENST00000608159 533 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC073114.1-201ENST00000612027 490 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AL356776.1-201ENST00000406574 447 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 MIR320B2-201ENST00000408479 138 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 MTND2P9-201ENST00000422293 931 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 MTCO2P19-201ENST00000427513 598 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AL606489.2-201ENST00000433886 234 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC145350.1-201ENST00000567426 208 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC073648.5-201ENST00000603502 305 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC087752.4-201ENST00000605911 462 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC007684.1-201ENST00000609671 477 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AC023510.2-201ENST00000622162 746 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 AL078596.1-201ENST00000624856 447 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 OR5AK4P-201ENST00000635912 903 ntBASIC1.13□□□□□ -2.23
LRRC40Q9H9A6 SNORA70.7-201ENST00000384159 133 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AC010154.1-201ENST00000425857 269 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 RNU1-142P-201ENST00000516682 145 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 TPRKBP2-201ENST00000565969 475 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AL121757.2-201ENST00000611223 313 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AC021506.2-201ENST00000612354 169 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AC139792.3-201ENST00000623525 224 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AC068647.2-201ENST00000637380 353 ntBASIC1.12□□□□□ -2.23
LRRC40Q9H9A6 AL391987.6-201ENST00000305671 199 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 MIR521-1-201ENST00000384902 87 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 AL353193.1-201ENST00000421444 268 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 AF186996.7-201ENST00000492781 209 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 RNA5SP401-201ENST00000515920 127 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.695-201ENST00000516715 107 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 AL157687.1-201ENST00000554853 619 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 AC146944.4-201ENST00000602697 718 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 AC004492.1-201ENST00000607036 742 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 snoZ196.1-201ENST00000625269 89 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 SCARNA4-201ENST00000629045 128 ntBASIC1.11□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.1-201ENST00000352915 104 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.296-201ENST00000364930 108 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 RNU4-66P-201ENST00000365199 138 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 RNY3P9-201ENST00000384727 106 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 AL049545.1-201ENST00000401856 572 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 CDK8P2-201ENST00000415020 547 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 AL359672.1-201ENST00000442302 409 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 HSPE1P13-201ENST00000451143 297 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 RPS3AP17-201ENST00000472594 777 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 MTND1P35-201ENST00000526739 508 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 MIR5692C1-201ENST00000585309 91 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 AC137590.2-201ENST00000619709 240 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 ZNF204P-201ENST00000416749 2397 ntBASIC1.1□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.378-201ENST00000365652 113 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 RNU6-214P-201ENST00000384130 107 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 RNU6-325P-201ENST00000411132 105 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AL663109.1-201ENST00000411498 844 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 TIMM9P3-201ENST00000428659 274 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 MRPS10P2-201ENST00000431226 381 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AL606517.2-201ENST00000442855 241 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 RPS27P1-201ENST00000450552 247 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AC103851.1-201ENST00000506833 274 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AC092436.3-201ENST00000511788 257 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 SNORA19.2-201ENST00000516013 114 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 RNU1-117P-201ENST00000517041 158 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 AL022345.2-201ENST00000606307 135 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 MIR8076-201ENST00000611401 83 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.09□□□□□ -2.23
LRRC40Q9H9A6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms