Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 snoU13.30-201ENST00000458951 104 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 AC007547.1-201ENST00000462177 490 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 AC130509.1-201ENST00000464158 433 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 SRRM1P2-201ENST00000464531 1192 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 AC083798.1-201ENST00000472671 131 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 AC073410.2-201ENST00000603240 332 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 AC009994.1-201ENST00000606889 253 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 MTND5P9-201ENST00000503854 1755 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
SCN4AP35499 RNU6-254P-201ENST00000363377 107 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 Y_RNA.409-201ENST00000383990 98 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 MTCYBP2-201ENST00000407745 171 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 SEPT14P3-201ENST00000439401 183 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.17□□□□□ -2.22
SCN4AP35499 AL732372.2-207ENST00000445840 183 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN4AP35499 SEPT14P2-201ENST00000453405 183 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 RPL23AP75-201ENST00000491601 451 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 SEPT14P4-201ENST00000513445 186 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 FO082796.1-201ENST00000523795 183 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 EIF4A1P12-201ENST00000551910 141 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC091135.1-201ENST00000585943 307 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC092747.3-201ENST00000603769 301 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC022202.1-201ENST00000613515 211 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC007742.2-201ENST00000618226 398 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC080100.1-201ENST00000624239 5356 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SCN4AP35499 MIR330-201ENST00000362196 94 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 RNU6-336P-201ENST00000364891 107 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 RNU6-38P-201ENST00000384085 107 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 MIR518A2-201ENST00000384966 87 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 RNU6-648P-201ENST00000410190 107 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 MTCO1P21-201ENST00000416634 589 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AL158823.1-201ENST00000418441 478 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 ERLEC1P1-201ENST00000433806 578 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 MTCO3P18-201ENST00000440206 761 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC083904.1-201ENST00000487828 231 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC107401.1-201ENST00000503426 685 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN4AP35499 AC005741.1-201ENST00000511094 432 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 RNU6-1146P-201ENST00000516282 102 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 RNU6-1198P-201ENST00000516904 67 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN4AP35499 CPDP1-201ENST00000579660 283 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AP001836.1-201ENST00000604675 523 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN4AP35499 AL357078.3-201ENST00000607528 618 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 MIR8076-201ENST00000611401 83 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AL359880.1-201ENST00000621879 266 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 AC139792.3-201ENST00000623525 224 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 MIR1321-201ENST00000637766 79 ntBASIC1.17□□□□□ -2.22
SCN4AP35499 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN4AP35499 Y_RNA.2-201ENST00000362330 96 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SCN4AP35499 MIR450B-201ENST00000401182 78 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AL356432.1-201ENST00000405809 419 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 RNU6-373P-201ENST00000411247 98 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN4AP35499 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN4AP35499 MTND3P9-201ENST00000429526 346 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 DLGAP5P1-201ENST00000430307 464 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AK3P2-201ENST00000507976 429 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 RPL39P5-202ENST00000512505 151 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 RNU7-193P-201ENST00000516723 65 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 SCOCP1-201ENST00000554676 349 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AL512360.1-201ENST00000555346 234 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AP003465.2-201ENST00000602571 373 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AL078605.1-201ENST00000603529 500 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 SNRPGP20-201ENST00000604477 205 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 PRR13P7-201ENST00000605538 430 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 AC097372.5-201ENST00000623665 376 ntBASIC1.16□□□□□ -2.22
SCN4AP35499 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SCN4AP35499 Y_RNA.167-201ENST00000363735 109 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 Y_RNA.318-201ENST00000365131 97 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 RNU6-190P-201ENST00000384154 102 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 SNORA26.3-201ENST00000391119 136 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 RNU1-78P-201ENST00000391248 165 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 MIR936-201ENST00000401264 98 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 RN7SKP61-201ENST00000410642 295 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 AC004941.2-201ENST00000427009 228 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 AC010975.2-201ENST00000427781 588 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.15□□□□□ -2.22
SCN4AP35499 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.15□□□□□ -2.22
SCN4AP35499 AL031274.1-201ENST00000450334 232 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 OR2AQ1P-201ENST00000451972 200 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 RNU7-180P-201ENST00000459240 63 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.15□□□□□ -2.22
SCN4AP35499 RNU6-1038P-201ENST00000516516 104 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.15□□□□□ -2.22
SCN4AP35499 AP000763.2-201ENST00000540641 163 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.15□□□□□ -2.22
SCN4AP35499 MTND1P15-201ENST00000579262 949 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 AL034555.1-201ENST00000604816 211 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 AL136221.1-201ENST00000621449 509 ntBASIC1.15□□□□□ -2.22
SCN4AP35499 RNA5SP276-201ENST00000362580 94 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 RNU6-227P-201ENST00000362865 103 ntBASIC1.15□□□□□ -2.23
SCN4AP35499 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms