Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AC092473.1-201ENST00000441098 221 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU7-34P-201ENST00000459394 64 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 CCDC34P1-201ENST00000507441 517 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-1146P-201ENST00000516282 102 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 AC008536.2-201ENST00000607284 349 ntBASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
CCNB1IP1Q9NPC3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-968P-201ENST00000384076 107 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 MIR586-201ENST00000385035 97 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 MTCYBP8-201ENST00000422855 651 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AL445567.1-201ENST00000439121 144 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AC025465.4-201ENST00000513422 638 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 SNORA14.1-201ENST00000516113 141 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 Z94722.1-201ENST00000604328 474 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AC109347.2-201ENST00000610220 349 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AC087683.2-201ENST00000611384 326 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 HULC.1-201ENST00000612720 240 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CCNB1IP1Q9NPC3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-1286P-201ENST00000383871 107 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 RPL21P1-201ENST00000399532 476 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 Y_RNA.595-201ENST00000410403 105 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AL358934.1-201ENST00000432346 324 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC073415.1-201ENST00000449240 153 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 RPS27P1-201ENST00000450552 247 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 MTCO3P8-201ENST00000453691 755 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC007215.1-201ENST00000464893 276 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC010493.1-201ENST00000513479 292 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-165P-201ENST00000517170 99 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 TPRKBP2-201ENST00000565969 475 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 MIR4424-201ENST00000585257 86 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 BX284668.6-201ENST00000606899 438 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC004492.1-201ENST00000607036 742 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC021506.2-201ENST00000612354 169 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 uc_338.34-201ENST00000617467 174 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AL603755.1-201ENST00000619504 163 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AC139792.3-201ENST00000623525 224 ntBASIC0.98□□□□□ -2.25
CCNB1IP1Q9NPC3 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-996P-201ENST00000365438 107 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-417P-201ENST00000384712 107 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 MIR549A-201ENST00000385268 96 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RNA5SP494-201ENST00000410653 129 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU7-63P-201ENST00000459054 62 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RPL39P38-201ENST00000467018 153 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-430P-201ENST00000517078 107 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 MTCO2P4-201ENST00000517968 247 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 MTND4P7-201ENST00000523876 130 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AL391840.1-201ENST00000571144 367 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AL929325.1-201ENST00000603096 117 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 Z99497.2-201ENST00000603634 310 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AP000907.4-201ENST00000604143 237 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AL022345.2-201ENST00000606307 135 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 AC091895.1-201ENST00000624494 256 ntBASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCNB1IP1Q9NPC3 RNU6-950P-201ENST00000384651 107 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 RNA5SP219-201ENST00000390940 113 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 RNA5SP109-201ENST00000391010 116 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 RPL23AP36-201ENST00000413895 458 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 CDK8P2-201ENST00000415020 547 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 MTND3P9-201ENST00000429526 346 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 CYCSP23-201ENST00000519781 313 ntBASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.96□□□□□ -2.26
CCNB1IP1Q9NPC3 AC064836.2-201ENST00000609491 462 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms