Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MIR5094-201ENST00000578766 85 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AC009994.1-201ENST00000606889 253 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AC104458.1-201ENST00000608243 463 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 RMST_3.1-201ENST00000611651 109 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AC139792.2-201ENST00000624218 587 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.47□□□□□ -2.17
NPAS2Q99743 AC024614.3-201ENST00000637860 256 ntBASIC1.47□□□□□ -2.17
NPAS2Q99743 RNU6-1329P-201ENST00000365664 107 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 Y_RNA.402-201ENST00000383972 102 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 RNU6-378P-201ENST00000384324 107 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 RNU6-296P-201ENST00000384608 107 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 RNU6-332P-201ENST00000391193 108 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 RNU6-321P-201ENST00000410912 106 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.46□□□□□ -2.18
NPAS2Q99743 AP1B1P2-201ENST00000416196 106 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.46□□□□□ -2.18
NPAS2Q99743 MTND3P9-201ENST00000429526 346 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
NPAS2Q99743 AC007395.1-201ENST00000451333 677 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 AMD1P1-201ENST00000457220 922 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 RNU7-14P-201ENST00000459331 62 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 HMGN2P26-201ENST00000463169 339 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 AC114801.2-201ENST00000503825 781 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.46□□□□□ -2.18
NPAS2Q99743 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 AC109635.3-201ENST00000529536 185 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.46□□□□□ -2.18
NPAS2Q99743 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NPAS2Q99743 SNORA43.4-201ENST00000629559 138 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NPAS2Q99743 AC245060.5-201ENST00000610778 3293 ntBASIC1.46□□□□□ -2.18
NPAS2Q99743 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NPAS2Q99743 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NPAS2Q99743 RNU6-414P-201ENST00000363705 104 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 RNU6-1317P-201ENST00000364582 104 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 RNU6-60P-201ENST00000364792 103 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 Y_RNA.450-201ENST00000384198 113 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NPAS2Q99743 RNU6-1106P-201ENST00000390845 107 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 SNORA12.2-201ENST00000391040 156 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 SNORD115-47-201ENST00000391226 86 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
NPAS2Q99743 MIR450B-201ENST00000401182 78 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 ARL5AP1-201ENST00000418991 388 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 AL359672.1-201ENST00000442302 409 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.45□□□□□ -2.18
NPAS2Q99743 AC005908.1-201ENST00000468701 347 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 RNU6-612P-201ENST00000516909 102 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 AC016256.1-201ENST00000547971 354 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.45□□□□□ -2.18
NPAS2Q99743 AC069114.2-201ENST00000604699 304 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.45□□□□□ -2.18
NPAS2Q99743 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.45□□□□□ -2.18
NPAS2Q99743 AC121333.1-201ENST00000567488 2709 ntBASIC1.45□□□□□ -2.18
NPAS2Q99743 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
NPAS2Q99743 Y_RNA.9-201ENST00000362354 101 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 Y_RNA.67-201ENST00000362870 100 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNY4P14-201ENST00000363656 96 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RPL21P111-201ENST00000418453 477 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.44□□□□□ -2.18
NPAS2Q99743 AC012306.1-201ENST00000423267 114 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.44□□□□□ -2.18
NPAS2Q99743 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.44□□□□□ -2.18
NPAS2Q99743 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.44□□□□□ -2.18
NPAS2Q99743 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNU6-1037P-201ENST00000459571 107 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RPS29P27-201ENST00000463711 170 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RPL9P9-202ENST00000466501 579 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 AC092989.1-201ENST00000481235 277 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 HMGN1P13-201ENST00000505795 138 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 AC025465.4-201ENST00000513422 638 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNU6-718P-201ENST00000516166 105 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.44□□□□□ -2.18
NPAS2Q99743 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
NPAS2Q99743 ZNF519P2-201ENST00000557032 169 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.44□□□□□ -2.18
NPAS2Q99743 AC068137.4-201ENST00000638485 296 ntBASIC1.44□□□□□ -2.18
NPAS2Q99743 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
NPAS2Q99743 AC009541.1-201ENST00000438279 2662 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 Y_RNA.89-201ENST00000363031 102 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 RNU6-254P-201ENST00000363377 107 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 RNU6-1026P-201ENST00000384465 108 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 MIR520A-201ENST00000384862 85 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 MIR208B-201ENST00000401172 77 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 MIR1287-201ENST00000408492 90 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 MIR1267-201ENST00000408723 78 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 RNU6-325P-201ENST00000411132 105 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.43□□□□□ -2.18
NPAS2Q99743 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.43□□□□□ -2.18
NPAS2Q99743 FTH1P12-201ENST00000432137 551 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms