Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 RNA5SP50-201ENST00000363731 107 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 RNA5SP240-201ENST00000365355 128 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 SNORA67.2-201ENST00000384300 149 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 MIR613-201ENST00000385248 95 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 AC097463.2-201ENST00000421074 142 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 AC002075.2-201ENST00000425207 252 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 AL606753.1-201ENST00000427435 87 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 RPS29P31-201ENST00000446147 164 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 AC091153.1-201ENST00000466297 402 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 SUMO2P18-201ENST00000518873 252 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 MIR4738-201ENST00000579134 87 ntBASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 Y_RNA.7-201ENST00000362352 102 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 U3.8-201ENST00000363675 217 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 U8.19-201ENST00000459095 133 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC136628.3-201ENST00000521868 290 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AL670379.2-201ENST00000604983 252 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 RNVU1-4-201ENST00000612985 164 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AL078604.3-201ENST00000615580 211 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC084757.4-201ENST00000616350 526 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AL359854.1-201ENST00000614203 1594 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTCHD1Q96NR3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PTCHD1Q96NR3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU6-801P-201ENST00000364087 105 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.238-201ENST00000364441 102 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 Y_RNA.243-201ENST00000364481 109 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU4-17P-201ENST00000365598 141 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU2-2P-201ENST00000410396 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU5E-9P-201ENST00000411164 104 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 AC093578.1-201ENST00000415219 368 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 EIF4EP4-201ENST00000424916 578 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 AL135790.2-201ENST00000437701 267 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 Z75741.1-201ENST00000446793 314 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RPL17P51-201ENST00000605218 238 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU2-4P-201ENST00000606190 192 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.15-201ENST00000611544 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.16-201ENST00000613119 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.12-201ENST00000613778 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.9-201ENST00000615427 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.11-201ENST00000616345 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.2-201ENST00000616535 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.3-201ENST00000617785 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.19-201ENST00000618602 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 RNU2-1-201ENST00000618664 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.6-201ENST00000619225 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.5-201ENST00000619465 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 U2.10-201ENST00000620268 191 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 AC008873.1-201ENST00000625051 138 ntBASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.27□□□□□ -1.89
PTCHD1Q96NR3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC068647.1-201ENST00000489539 2265 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 RNU6-704P-201ENST00000364162 103 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 MIR548I2-201ENST00000408348 149 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 PRSS3P4-201ENST00000453323 162 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 RPS27P26-201ENST00000494583 239 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC026333.2-201ENST00000542164 106 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC008739.2-201ENST00000597006 317 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 RPL30P11-203ENST00000598995 310 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC004832.4-201ENST00000608952 331 ntBASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PTCHD1Q96NR3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms