Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.83□□□□□ -1.8
NFKB1P19838 MIR4286-201ENST00000580651 93 ntBASIC3.83□□□□□ -1.8
NFKB1P19838 AC120024.3-201ENST00000603167 156 ntBASIC3.83□□□□□ -1.8
NFKB1P19838 AP003357.1-201ENST00000604497 148 ntBASIC3.83□□□□□ -1.8
NFKB1P19838 AC068724.3-201ENST00000625906 87 ntBASIC3.83□□□□□ -1.8
NFKB1P19838 FAM35DP-201ENST00000323387 2712 ntBASIC3.83□□□□□ -1.8
NFKB1P19838 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.83□□□□□ -1.8
NFKB1P19838 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NFKB1P19838 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
NFKB1P19838 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NFKB1P19838 snoU2_19.1-201ENST00000362361 80 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 SNORA25.7-201ENST00000364375 127 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 MIR518C-201ENST00000384822 101 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 Y_RNA.584-201ENST00000391090 114 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 Y_RNA.622-201ENST00000411091 108 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 RPS29P7-201ENST00000439662 171 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 AL357134.1-201ENST00000445848 426 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 AC010099.1-201ENST00000455434 375 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 RN7SL93P-201ENST00000463035 293 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 RNU6-589P-201ENST00000516485 107 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 RN7SKP209-201ENST00000516888 304 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 AC090142.3-201ENST00000519012 385 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.82□□□□□ -1.8
NFKB1P19838 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NFKB1P19838 MIR3914-2-201ENST00000637339 95 ntBASIC3.82□□□□□ -1.8
NFKB1P19838 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NFKB1P19838 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NFKB1P19838 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
NFKB1P19838 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NFKB1P19838 RNU6-198P-201ENST00000384258 104 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NFKB1P19838 AC016925.1-201ENST00000458303 298 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 HMGN2P9-201ENST00000476875 229 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 RN7SKP21-201ENST00000516503 220 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 RNU6-1337P-201ENST00000516525 95 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 AP000867.2-201ENST00000532468 320 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.81□□□□□ -1.8
NFKB1P19838 Y_RNA.757-201ENST00000578934 114 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
NFKB1P19838 MIR378D2-201ENST00000580636 98 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 AC002076.2-201ENST00000617362 122 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 AC244205.2-202ENST00000635781 342 ntBASIC3.81□□□□□ -1.8
NFKB1P19838 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
NFKB1P19838 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NFKB1P19838 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
NFKB1P19838 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
NFKB1P19838 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NFKB1P19838 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
NFKB1P19838 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.8□□□□□ -1.8
NFKB1P19838 RNU6-235P-201ENST00000362644 107 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 Y_RNA.294-201ENST00000364916 102 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 RNU6-1323P-201ENST00000384025 107 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 SNORD116-13-201ENST00000384408 92 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 MIR23B-201ENST00000384832 97 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 RNA5SP424-201ENST00000390988 115 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AL355796.1-201ENST00000406706 323 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 SNORA79-201ENST00000408376 140 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AC245047.4-201ENST00000433189 144 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AL121890.1-201ENST00000435457 205 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.8□□□□□ -1.8
NFKB1P19838 SNRPGP8-201ENST00000454064 226 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AC112771.1-201ENST00000463581 102 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 RNU6-772P-201ENST00000516042 105 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 RN7SKP83-201ENST00000516512 178 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 MIR3613-201ENST00000579844 87 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AL031274.2-201ENST00000599419 203 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 RNU1-30P-201ENST00000606575 163 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.8□□□□□ -1.8
NFKB1P19838 AF117829.1-206ENST00000621883 3802 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NFKB1P19838 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NFKB1P19838 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NFKB1P19838 AC010680.1-201ENST00000590024 3590 ntBASIC3.8□□□□□ -1.8
NFKB1P19838 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NFKB1P19838 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NFKB1P19838 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
NFKB1P19838 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 RNA5SP267-201ENST00000364893 126 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 SNORA51.4-201ENST00000364993 124 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NFKB1P19838 AL139095.1-201ENST00000404326 391 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 AL512604.1-201ENST00000404812 257 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 RN7SKP101-201ENST00000411376 320 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 CYCSP49-201ENST00000420810 319 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 YME1L1P1-201ENST00000429435 297 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 NDUFB1P1-201ENST00000435191 180 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 RPL36AP21-201ENST00000490372 323 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms