Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC022868.1-201ENST00000517767 391 ntBASIC2.7□□□□□ -1.98
SNHG28P0DPA3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.7□□□□□ -1.98
SNHG28P0DPA3 AC024405.2-202ENST00000532731 184 ntBASIC2.7□□□□□ -1.98
SNHG28P0DPA3 AL645944.1-201ENST00000603857 493 ntBASIC2.7□□□□□ -1.98
SNHG28P0DPA3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.7□□□□□ -1.98
SNHG28P0DPA3 AC241585.2-209ENST00000638217 143 ntBASIC2.7□□□□□ -1.98
SNHG28P0DPA3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.7□□□□□ -1.98
SNHG28P0DPA3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 RNU6-105P-201ENST00000363909 104 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 RNU6-17P-201ENST00000384245 107 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 RNU6-18P-201ENST00000384527 107 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 MIR518D-201ENST00000385014 87 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 Z98742.3-201ENST00000418637 326 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 EIF1P2-201ENST00000428233 350 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 RPL26P26-201ENST00000480251 434 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 RNU7-175P-201ENST00000515915 61 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 CASP1P1-201ENST00000526345 212 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 RPL23AP88-201ENST00000605759 454 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 AC068831.7-201ENST00000616954 363 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 AL359854.1-201ENST00000614203 1594 ntBASIC2.69□□□□□ -1.98
SNHG28P0DPA3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNHG28P0DPA3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 SNORD113-1-201ENST00000365321 69 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AL356320.1-201ENST00000429616 163 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC005002.2-201ENST00000438228 269 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 Z82210.1-201ENST00000440037 231 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC243964.1-201ENST00000441814 261 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC009296.1-201ENST00000443146 155 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AL078601.1-201ENST00000444542 271 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC016700.2-201ENST00000446011 156 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 snoU13.30-201ENST00000458951 104 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AP000870.1-201ENST00000472927 406 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 RPS27AP9-201ENST00000477681 438 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 RNU6-56P-201ENST00000516986 93 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 MTND5P41-201ENST00000517498 206 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AC109479.2-201ENST00000517842 174 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 SNORA43.4-201ENST00000629559 138 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.68□□□□□ -1.98
SNHG28P0DPA3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.68□□□□□ -1.98
SNHG28P0DPA3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU6-961P-201ENST00000363893 105 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU6-290P-201ENST00000365212 101 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 MIR325-201ENST00000385260 98 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RPS15AP28-201ENST00000435088 386 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AC098831.1-201ENST00000440661 216 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNY3P16-201ENST00000516338 101 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 SNORA43.2-201ENST00000516652 128 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNA5SP468-201ENST00000516782 93 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 RNU6-703P-201ENST00000516946 107 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AP002392.1-201ENST00000537692 208 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 AC055872.1-201ENST00000570978 278 ntBASIC2.67□□□□□ -1.98
SNHG28P0DPA3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNHG28P0DPA3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 RNU6-173P-201ENST00000364215 104 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 SNORD114-30-201ENST00000364448 72 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 SNORD32A-201ENST00000364805 84 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 SNORD63-201ENST00000384262 68 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 MIR32-201ENST00000384965 70 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 RPS4XP3-201ENST00000398541 413 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
SNHG28P0DPA3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.66□□□□□ -1.98
SNHG28P0DPA3 AC098614.2-201ENST00000426040 255 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms