Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 HSPE1P4-201ENST00000550617 308 ntBASIC4.02□□□□□ -1.77
NEFMP07197 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.02□□□□□ -1.77
NEFMP07197 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.02□□□□□ -1.77
NEFMP07197 AC005176.2-201ENST00000596933 147 ntBASIC4.02□□□□□ -1.77
NEFMP07197 AP001485.1-201ENST00000604799 199 ntBASIC4.02□□□□□ -1.77
NEFMP07197 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.02□□□□□ -1.77
NEFMP07197 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.02□□□□□ -1.77
NEFMP07197 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEFMP07197 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NEFMP07197 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NEFMP07197 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEFMP07197 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEFMP07197 RNU6-961P-201ENST00000363893 105 ntBASIC4.01□□□□□ -1.77
NEFMP07197 SNORA46-201ENST00000384762 135 ntBASIC4.01□□□□□ -1.77
NEFMP07197 MIR888-201ENST00000401186 77 ntBASIC4.01□□□□□ -1.77
NEFMP07197 MIR887-201ENST00000401258 79 ntBASIC4.01□□□□□ -1.77
NEFMP07197 RPS12P18-201ENST00000442381 270 ntBASIC4.01□□□□□ -1.77
NEFMP07197 UQCRHP3-201ENST00000451503 251 ntBASIC4.01□□□□□ -1.77
NEFMP07197 S100A11P2-201ENST00000467589 312 ntBASIC4.01□□□□□ -1.77
NEFMP07197 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEFMP07197 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NEFMP07197 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEFMP07197 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEFMP07197 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NEFMP07197 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEFMP07197 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEFMP07197 AC092268.1-201ENST00000342691 405 ntBASIC4□□□□□ -1.77
NEFMP07197 RN7SKP51-201ENST00000410781 304 ntBASIC4□□□□□ -1.77
NEFMP07197 NDUFS5P4-201ENST00000412983 318 ntBASIC4□□□□□ -1.77
NEFMP07197 RPL23AP58-201ENST00000440453 469 ntBASIC4□□□□□ -1.77
NEFMP07197 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4□□□□□ -1.77
NEFMP07197 RNA5SP54-201ENST00000516951 92 ntBASIC4□□□□□ -1.77
NEFMP07197 MRPS18CP4-201ENST00000535821 231 ntBASIC4□□□□□ -1.77
NEFMP07197 AC021231.3-201ENST00000558497 370 ntBASIC4□□□□□ -1.77
NEFMP07197 MIR3144-201ENST00000579460 79 ntBASIC4□□□□□ -1.77
NEFMP07197 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.99□□□□□ -1.77
NEFMP07197 MIR544A-201ENST00000384855 91 ntBASIC3.99□□□□□ -1.77
NEFMP07197 Y_RNA.595-201ENST00000410403 105 ntBASIC3.99□□□□□ -1.77
NEFMP07197 RNA5SP344-201ENST00000411081 104 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AL451074.5-201ENST00000415894 435 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AC078809.1-201ENST00000427601 140 ntBASIC3.99□□□□□ -1.77
NEFMP07197 UQCRBP2-201ENST00000447827 297 ntBASIC3.99□□□□□ -1.77
NEFMP07197 MRPS10P1-201ENST00000448483 130 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AC005042.3-201ENST00000453230 174 ntBASIC3.99□□□□□ -1.77
NEFMP07197 CYCSP23-201ENST00000519781 313 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.99□□□□□ -1.77
NEFMP07197 RPL21P9-201ENST00000556149 474 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.99□□□□□ -1.77
NEFMP07197 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.99□□□□□ -1.77
NEFMP07197 AC011471.1-201ENST00000585766 187 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AL078605.1-201ENST00000603529 500 ntBASIC3.99□□□□□ -1.77
NEFMP07197 AC135776.4-201ENST00000624300 1904 ntBASIC3.99□□□□□ -1.77
NEFMP07197 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NEFMP07197 AL109809.4-201ENST00000603520 2185 ntBASIC3.99□□□□□ -1.77
NEFMP07197 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEFMP07197 BX322639.1-202ENST00000423987 2213 ntBASIC3.98□□□□□ -1.77
NEFMP07197 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEFMP07197 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.98□□□□□ -1.77
NEFMP07197 MAPK10-266ENST00000641066 6555 ntBASIC3.98□□□□□ -1.77
NEFMP07197 FAM35BP-202ENST00000497389 3337 ntBASIC3.98□□□□□ -1.77
NEFMP07197 RNU6-923P-201ENST00000364753 107 ntBASIC3.98□□□□□ -1.77
NEFMP07197 SNORA54-201ENST00000384281 123 ntBASIC3.98□□□□□ -1.77
NEFMP07197 RNU6-804P-201ENST00000384286 107 ntBASIC3.98□□□□□ -1.77
NEFMP07197 Y_RNA.597-201ENST00000410463 100 ntBASIC3.98□□□□□ -1.77
NEFMP07197 RNU6-394P-201ENST00000410735 107 ntBASIC3.98□□□□□ -1.77
NEFMP07197 RNA5SP38-201ENST00000410750 119 ntBASIC3.98□□□□□ -1.77
NEFMP07197 RPS26P42-201ENST00000413485 326 ntBASIC3.98□□□□□ -1.77
NEFMP07197 RNA5SP310-201ENST00000459084 116 ntBASIC3.98□□□□□ -1.77
NEFMP07197 SNRPGP7-201ENST00000469016 106 ntBASIC3.98□□□□□ -1.77
NEFMP07197 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.98□□□□□ -1.77
NEFMP07197 CKS1BP7-201ENST00000522230 235 ntBASIC3.98□□□□□ -1.77
NEFMP07197 AC093732.2-201ENST00000607950 274 ntBASIC3.98□□□□□ -1.77
NEFMP07197 AC108706.1-201ENST00000611053 297 ntBASIC3.98□□□□□ -1.77
NEFMP07197 AC010999.1-201ENST00000611856 324 ntBASIC3.98□□□□□ -1.77
NEFMP07197 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEFMP07197 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.97□□□□□ -1.77
NEFMP07197 Y_RNA.262-201ENST00000364641 102 ntBASIC3.97□□□□□ -1.77
NEFMP07197 FTH1P15-201ENST00000406984 280 ntBASIC3.97□□□□□ -1.77
NEFMP07197 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.97□□□□□ -1.77
NEFMP07197 RPS29P12-201ENST00000460178 152 ntBASIC3.97□□□□□ -1.77
NEFMP07197 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.97□□□□□ -1.77
NEFMP07197 RNU6-346P-201ENST00000516288 111 ntBASIC3.97□□□□□ -1.77
NEFMP07197 SCARNA13-201ENST00000516672 275 ntBASIC3.97□□□□□ -1.77
NEFMP07197 AC007536.1-201ENST00000533382 349 ntBASIC3.97□□□□□ -1.77
NEFMP07197 AC233702.2-202ENST00000562547 291 ntBASIC3.97□□□□□ -1.77
NEFMP07197 AL451007.1-201ENST00000595491 289 ntBASIC3.97□□□□□ -1.77
NEFMP07197 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.97□□□□□ -1.77
NEFMP07197 AC022441.3-201ENST00000605737 136 ntBASIC3.97□□□□□ -1.77
NEFMP07197 AL365361.1-201ENST00000566942 3481 ntBASIC3.97□□□□□ -1.77
NEFMP07197 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.97□□□□□ -1.77
NEFMP07197 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEFMP07197 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
NEFMP07197 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.97□□□□□ -1.77
NEFMP07197 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.96□□□□□ -1.77
NEFMP07197 RNU6-799P-201ENST00000363567 107 ntBASIC3.96□□□□□ -1.78
NEFMP07197 RNU6-884P-201ENST00000363889 107 ntBASIC3.96□□□□□ -1.78
NEFMP07197 SNORA72.2-201ENST00000365028 127 ntBASIC3.96□□□□□ -1.78
NEFMP07197 Y_RNA.308-201ENST00000365043 101 ntBASIC3.96□□□□□ -1.78
NEFMP07197 MIR487A-201ENST00000385009 80 ntBASIC3.96□□□□□ -1.78
NEFMP07197 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms