Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 MIR23A-201ENST00000385245 73 ntBASIC3.21□□□□□ -1.9
KLF4O43474 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
KLF4O43474 SNORD105B-201ENST00000458770 79 ntBASIC3.21□□□□□ -1.9
KLF4O43474 AL512605.2-201ENST00000592972 256 ntBASIC3.21□□□□□ -1.9
KLF4O43474 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KLF4O43474 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.9
KLF4O43474 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KLF4O43474 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KLF4O43474 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
KLF4O43474 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLF4O43474 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
KLF4O43474 Y_RNA.54-201ENST00000362766 105 ntBASIC3.2□□□□□ -1.9
KLF4O43474 Y_RNA.136-201ENST00000363444 102 ntBASIC3.2□□□□□ -1.9
KLF4O43474 RNU6-379P-201ENST00000363813 104 ntBASIC3.2□□□□□ -1.9
KLF4O43474 Y_RNA.477-201ENST00000384352 108 ntBASIC3.2□□□□□ -1.9
KLF4O43474 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
KLF4O43474 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.2□□□□□ -1.9
KLF4O43474 RNU2-12P-201ENST00000517216 168 ntBASIC3.2□□□□□ -1.9
KLF4O43474 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.2□□□□□ -1.9
KLF4O43474 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.2□□□□□ -1.9
KLF4O43474 AC090616.3-201ENST00000582184 217 ntBASIC3.2□□□□□ -1.9
KLF4O43474 BX284668.6-201ENST00000606899 438 ntBASIC3.2□□□□□ -1.9
KLF4O43474 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.2□□□□□ -1.9
KLF4O43474 AP003355.3-201ENST00000623465 114 ntBASIC3.2□□□□□ -1.9
KLF4O43474 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KLF4O43474 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KLF4O43474 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLF4O43474 Y_RNA.515-201ENST00000384535 112 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
KLF4O43474 AC008134.1-201ENST00000420943 193 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
KLF4O43474 CYCSP4-201ENST00000429682 331 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AC108059.2-201ENST00000434626 151 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.19□□□□□ -1.9
KLF4O43474 SNORA4.4-201ENST00000515921 135 ntBASIC3.19□□□□□ -1.9
KLF4O43474 SNORA70.12-201ENST00000516084 153 ntBASIC3.19□□□□□ -1.9
KLF4O43474 RNU6-667P-201ENST00000517186 102 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AP002001.1-203ENST00000534002 267 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AC005357.1-201ENST00000588399 301 ntBASIC3.19□□□□□ -1.9
KLF4O43474 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
KLF4O43474 MFSD8-236ENST00000641509 4050 ntBASIC3.19□□□□□ -1.9
KLF4O43474 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.19□□□□□ -1.9
KLF4O43474 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLF4O43474 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLF4O43474 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KLF4O43474 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.18□□□□□ -1.9
KLF4O43474 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.18□□□□□ -1.9
KLF4O43474 Y_RNA.20-201ENST00000362479 113 ntBASIC3.18□□□□□ -1.9
KLF4O43474 SNORD9-201ENST00000362566 104 ntBASIC3.18□□□□□ -1.9
KLF4O43474 Y_RNA.44-201ENST00000362676 108 ntBASIC3.18□□□□□ -1.9
KLF4O43474 RNA5SP72-201ENST00000364442 117 ntBASIC3.18□□□□□ -1.9
KLF4O43474 SNORA25B-201ENST00000365507 128 ntBASIC3.18□□□□□ -1.9
KLF4O43474 RNU6-1235P-201ENST00000384559 107 ntBASIC3.18□□□□□ -1.9
KLF4O43474 U3.40-201ENST00000408706 208 ntBASIC3.18□□□□□ -1.9
KLF4O43474 RNU6-710P-201ENST00000410424 105 ntBASIC3.18□□□□□ -1.9
KLF4O43474 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
KLF4O43474 AC123900.1-201ENST00000420390 96 ntBASIC3.18□□□□□ -1.9
KLF4O43474 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.18□□□□□ -1.9
KLF4O43474 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.18□□□□□ -1.9
KLF4O43474 RPL23AP3-201ENST00000453844 468 ntBASIC3.18□□□□□ -1.9
KLF4O43474 RNU6-498P-201ENST00000459468 107 ntBASIC3.18□□□□□ -1.9
KLF4O43474 Y_RNA.673-201ENST00000516306 88 ntBASIC3.18□□□□□ -1.9
KLF4O43474 SNORA70.19-201ENST00000516717 90 ntBASIC3.18□□□□□ -1.9
KLF4O43474 RNU6-794P-201ENST00000517261 64 ntBASIC3.18□□□□□ -1.9
KLF4O43474 AL161756.2-201ENST00000604597 246 ntBASIC3.18□□□□□ -1.9
KLF4O43474 AC090425.1-201ENST00000610007 140 ntBASIC3.18□□□□□ -1.9
KLF4O43474 AC096577.2-201ENST00000611455 153 ntBASIC3.18□□□□□ -1.9
KLF4O43474 U2.14-201ENST00000615943 113 ntBASIC3.18□□□□□ -1.9
KLF4O43474 AC135776.4-201ENST00000624300 1904 ntBASIC3.18□□□□□ -1.9
KLF4O43474 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KLF4O43474 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KLF4O43474 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KLF4O43474 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.17□□□□□ -1.9
KLF4O43474 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
KLF4O43474 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLF4O43474 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLF4O43474 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
KLF4O43474 SNORD27-201ENST00000363981 72 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-454P-201ENST00000364292 107 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-1318P-201ENST00000365389 103 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-57P-201ENST00000411348 103 ntBASIC3.17□□□□□ -1.9
KLF4O43474 SRIP3-201ENST00000413200 219 ntBASIC3.17□□□□□ -1.9
KLF4O43474 DBIP2-201ENST00000419076 262 ntBASIC3.17□□□□□ -1.9
KLF4O43474 AL353705.1-201ENST00000433468 480 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RPL23AP83-201ENST00000434984 473 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-221P-201ENST00000459541 99 ntBASIC3.17□□□□□ -1.9
KLF4O43474 AC093259.1-201ENST00000509755 300 ntBASIC3.17□□□□□ -1.9
KLF4O43474 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-991P-201ENST00000516168 107 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-388P-201ENST00000517012 105 ntBASIC3.17□□□□□ -1.9
KLF4O43474 RNU6-389P-201ENST00000517048 105 ntBASIC3.17□□□□□ -1.9
KLF4O43474 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.17□□□□□ -1.9
KLF4O43474 MIR3668-201ENST00000582138 75 ntBASIC3.17□□□□□ -1.9
KLF4O43474 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
KLF4O43474 AC025754.2-201ENST00000606491 432 ntBASIC3.17□□□□□ -1.9
KLF4O43474 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KLF4O43474 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KLF4O43474 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLF4O43474 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms